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mRpS5 mitochondrial ribosomal protein S5 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3355089, updated on 10-May-2024

Summary

Official Symbol
mRpS5provided by FlyBase
Official Full Name
mitochondrial ribosomal protein S5provided by FlyBase
Primary source
FLYBASE:FBgn0287187
Locus tag
Dmel_CG40049
See related
AllianceGenome:FB:FBgn0287187
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
80Fa; BcDNA:RE47909; CG40049; Dmel\CG40049; l(3)80Fa; l(3)Lh8; l8; MRP-S5; mRps5; MrpS5
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be part of mitochondrial small ribosomal subunit. Is expressed in several structures, including adult heart; embryonic/larval muscle system; extended germ band embryo; gut section; and visceral muscle primordium. Orthologous to human MRPS5 (mitochondrial ribosomal protein S5). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See mRpS5 in Genome Data Viewer
Location:
80F9-80F9; 3-47 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (24537236..24543534)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (24530335..24536634)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene neverland Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

  • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of ribosome TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
involved_in mitochondrial translation TAS
Traceable Author Statement
more info
PubMed 
involved_in translation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of mitochondrial small ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
part_of mitochondrial small ribosomal subunit TAS
Traceable Author Statement
more info
PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
mitochondrial ribosomal protein S5
Names
CG40049-PA
CG40049-PC
CG40049-PD
lethal (3) 80Fa
lethal 8
lethal8
mRpS5-PA
mRpS5-PC
mRpS5-PD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    24537236..24543534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001043187.2NP_001036652.1  mitochondrial ribosomal protein S5, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036652.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SYP9
    Conserved Domains (3) summary
    TIGR01021
    Location:178323
    rpsE_bact; ribosomal protein S5, bacterial/organelle type
    pfam00333
    Location:171235
    Ribosomal_S5; Ribosomal protein S5, N-terminal domain
    pfam03719
    Location:251318
    Ribosomal_S5_C; Ribosomal protein S5, C-terminal domain
  2. NM_001043188.3NP_001036653.1  mitochondrial ribosomal protein S5, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036653.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SYP9
    Conserved Domains (3) summary
    TIGR01021
    Location:178323
    rpsE_bact; ribosomal protein S5, bacterial/organelle type
    pfam00333
    Location:171235
    Ribosomal_S5; Ribosomal protein S5, N-terminal domain
    pfam03719
    Location:251318
    Ribosomal_S5_C; Ribosomal protein S5, C-terminal domain
  3. NM_001043186.2NP_001036651.1  mitochondrial ribosomal protein S5, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036651.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0E8A8