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CG17906 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34224, updated on 10-May-2024

Summary

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Official Symbol
CG17906provided by FlyBase
Primary source
FLYBASE:FBgn0032086
Locus tag
Dmel_CG17906
See related
AllianceGenome:FB:FBgn0032086
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG17906
Summary
Predicted to be active in membrane. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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Location:
29F7-29F7; 2-34 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (8994391..8995617)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (8994391..8995617)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene rolling stone Neighboring gene uncharacterized protein Neighboring gene alien Neighboring gene uncharacterized protein Neighboring gene Trypsin 29F Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Population-scale long-read sequencing uncovers transposable elements associated with gene expression variation and adaptive signatures in Drosophila. Rech GE, et al. Nat Commun, 2022 Apr 12. PMID 35413957, Free PMC Article
  2. Differential gene expression related to Nora virus infection of Drosophila melanogaster. Cordes EJ, et al. Virus Res, 2013 Aug. PMID 23603562, Free PMC Article
  3. Genome features of "Dark-fly", a Drosophila line reared long-term in a dark environment. Izutsu M, et al. PLoS One, 2012. PMID 22432011, Free PMC Article
  4. Identification of pathways regulating cell size and cell-cycle progression by RNAi. Björklund M, et al. Nature, 2006 Feb 23. PMID 16496002
  5. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG17906-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    8994391..8995617
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135422.3 → NP_609266.1  uncharacterized protein Dmel_CG17906 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609266.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VLF7
    Related
    FBpp0079363
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VLF7 Q9VLF7

Gene LinkOut

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