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CG4658 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34325, updated on 10-May-2024

Summary

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Official Symbol
CG4658provided by FlyBase
Primary source
FLYBASE:FBgn0032170
Locus tag
Dmel_CG4658
See related
AllianceGenome:FB:FBgn0032170
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG4658
Summary
Is expressed in adult head and organism. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See CG4658 in Genome Data Viewer
Location:
30F2-30F2; 2-38 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9957132..9960168)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9957132..9960168)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44872 Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR43683 Neighboring gene DNA replication-related element factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Abundant conserved microRNA target sites in the 5'-untranslated region and coding sequence. Zhou X, et al. Genetica, 2009 Nov. PMID 19578934
  2. Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing. Mazloomian A, et al. RNA Biol, 2015. PMID 26512413, Free PMC Article
  3. Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. Blanco E, et al. BMC Dev Biol, 2010 Sep 2. PMID 20813047, Free PMC Article
  4. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article
  5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG4658-PA
CG4658-PB
CG4658-PC
CG4658-PD
CG4658-PE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    9957132..9960168
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298860.1 → NP_001285789.1  uncharacterized protein Dmel_CG4658, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285789.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VL57
    Conserved Domains (1) summary
    smart00584
    Location:327 → 475
    TLDc; domain in TBC and LysM domain containing proteins

  2. NM_176006.3 → NP_788020.1  uncharacterized protein Dmel_CG4658, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_788020.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VL57
    Related
    FBpp0079481
    Conserved Domains (1) summary
    smart00584
    Location:327 → 475
    TLDc; domain in TBC and LysM domain containing proteins

  3. NM_176007.3 → NP_788021.1  uncharacterized protein Dmel_CG4658, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_788021.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VL57
    Related
    FBpp0079482
    Conserved Domains (1) summary
    smart00584
    Location:327 → 475
    TLDc; domain in TBC and LysM domain containing proteins

  4. NM_176008.4 → NP_788022.1  uncharacterized protein Dmel_CG4658, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_788022.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VL57
    Related
    FBpp0079483
    Conserved Domains (1) summary
    smart00584
    Location:327 → 475
    TLDc; domain in TBC and LysM domain containing proteins

  5. NM_001298861.1 → NP_001285790.1  uncharacterized protein Dmel_CG4658, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285790.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    X2J7M7
    Conserved Domains (1) summary
    smart00584
    Location:327 → 471
    TLDc; domain in TBC and LysM domain containing proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VL57 Q9VL57
X2J7M7 X2J7M7

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