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PKD1P6 polycystin 1, transient receptor potential channel interacting pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 353511, updated on 11-Jun-2021

Summary

Official Symbol
PKD1P6provided by HGNC
Official Full Name
polycystin 1, transient receptor potential channel interacting pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:30070
See related
Ensembl:ENSG00000250251
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HG6
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Genomic context

See PKD1P6 in Genome Data Viewer
Location:
16p13.11
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (15125139..15154873, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (15218996..15248730, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene pyridoxal dependent decarboxylase domain containing 1 Neighboring gene Sharpr-MPRA regulatory region 13846 Neighboring gene uncharacterized LOC100505915 Neighboring gene RRN3 homolog, RNA polymerase I transcription factor Neighboring gene PKD1P6-NPIPP1 readthrough Neighboring gene nuclear pore complex interacting protein pseudogene 1 Neighboring gene microRNA 6511b-2 Neighboring gene microRNA 3180-4 Neighboring gene uncharacterized LOC105371096 Neighboring gene uncharacterized LOC105371097

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • GPS, PLAT and transmembrane domain-containing protein
  • polycystic kidney disease 1 (autosomal dominant) pseudogene 6

Clone Names

  • FLJ00285, FLJ00286, FLJ13314, FLJ56864, FLJ56874

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002799.5 

    Range
    101..29835
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    15125139..15154873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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