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Proser3 proline and serine rich 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 361541, updated on 3-Apr-2024

Summary

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Official Symbol
Proser3provided by RGD
Official Full Name
proline and serine rich 3provided by RGD
Primary source
RGD:1565712
See related
Ensembl:ENSRNOG00000024625 AllianceGenome:RGD:1565712
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1565712
Summary
Orthologous to human PROSER3 (proline and serine rich 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Kidney (RPKM 18.7), Adrenal (RPKM 18.0) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Proser3 in Genome Data Viewer
Location:
1q21
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (94920802..94934126, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (85793363..85806682, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (88994552..89007808, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene similar to Gene model 1082 Neighboring gene Rho GTPase activating protein 33 Neighboring gene uncharacterized LOC120097050 Neighboring gene heat shock protein family B (small) member 6 Neighboring gene lin-37 DREAM MuvB core complex component Neighboring gene presenilin enhancer gamma secretase subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC188051

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in centrosome ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
proline and serine-rich protein 3
Names
uncharacterized protein C19orf55 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127579.1 → NP_001121051.1  proline and serine-rich protein 3

    See identical proteins and their annotated locations for NP_001121051.1

    Status: PROVISIONAL

    Source sequence(s)
    BC166499
    UniProtKB/TrEMBL
    B2GV25, F7ELW7
    Related
    ENSRNOP00000032379.5, ENSRNOT00000032363.5
    Conserved Domains (2) summary
    PHA03247
    Location:219 → 514
    PHA03247; large tegument protein UL36; Provisional
    cd12957
    Location:588 → 632
    SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    94920802..94934126 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063266459.1 → XP_063122529.1  proline and serine-rich protein 3 isoform X2

  2. XM_006228774.5 → XP_006228836.1  proline and serine-rich protein 3 isoform X1

    See identical proteins and their annotated locations for XP_006228836.1

    UniProtKB/TrEMBL
    B2GV25, F7ELW7
    Conserved Domains (2) summary
    PHA03247
    Location:219 → 514
    PHA03247; large tegument protein UL36; Provisional
    cd12957
    Location:588 → 632
    SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain

  3. XM_063266466.1 → XP_063122536.1  proline and serine-rich protein 3 isoform X3

  4. XM_008759168.4 → XP_008757390.2  proline and serine-rich protein 3 isoform X2

    UniProtKB/TrEMBL
    F7ELW7
    Conserved Domains (2) summary
    PHA03247
    Location:218 → 513
    PHA03247; large tegument protein UL36; Provisional
    cd12957
    Location:587 → 631
    SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain

  5. XM_063266474.1 → XP_063122544.1  proline and serine-rich protein 3 isoform X4

  6. XM_063266464.1 → XP_063122534.1  proline and serine-rich protein 3 isoform X2

  7. XM_063266446.1 → XP_063122516.1  proline and serine-rich protein 3 isoform X1

    UniProtKB/TrEMBL
    B2GV25

  8. XM_063266471.1 → XP_063122541.1  proline and serine-rich protein 3 isoform X4

  9. XM_063266457.1 → XP_063122527.1  proline and serine-rich protein 3 isoform X2

  10. XM_063266455.1 → XP_063122525.1  proline and serine-rich protein 3 isoform X2

  11. XM_039081900.2 → XP_038937828.1  proline and serine-rich protein 3 isoform X1

    UniProtKB/TrEMBL
    B2GV25, F7ELW7
    Conserved Domains (2) summary
    PHA03247
    Location:219 → 514
    PHA03247; large tegument protein UL36; Provisional
    cd12957
    Location:588 → 632
    SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain

  12. XM_063266456.1 → XP_063122526.1  proline and serine-rich protein 3 isoform X2

  13. XM_006228772.3 → XP_006228834.1  proline and serine-rich protein 3 isoform X1

    See identical proteins and their annotated locations for XP_006228834.1

    UniProtKB/TrEMBL
    B2GV25, F7ELW7
    Conserved Domains (2) summary
    PHA03247
    Location:219 → 514
    PHA03247; large tegument protein UL36; Provisional
    cd12957
    Location:588 → 632
    SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain

  14. XM_063266438.1 → XP_063122508.1  proline and serine-rich protein 3 isoform X1

    UniProtKB/TrEMBL
    B2GV25

  15. XM_063266453.1 → XP_063122523.1  proline and serine-rich protein 3 isoform X2

  16. XM_039081899.2 → XP_038937827.1  proline and serine-rich protein 3 isoform X1

    UniProtKB/TrEMBL
    B2GV25, F7ELW7
    Conserved Domains (2) summary
    PHA03247
    Location:219 → 514
    PHA03247; large tegument protein UL36; Provisional
    cd12957
    Location:588 → 632
    SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain

  17. XM_039081906.2 → XP_038937834.1  proline and serine-rich protein 3 isoform X5

    UniProtKB/TrEMBL
    F7ELW7
    Conserved Domains (2) summary
    PHA03247
    Location:147 → 510
    PHA03247; large tegument protein UL36; Provisional
    cd12957
    Location:517 → 561
    SKA3_N; Spindle and kinetochore-associated protein 3, N-terminal domain
Nucleotide Protein Strain
Heading Accession and Version

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