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Ntaq1 N-terminal glutamine amidase 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 362914, updated on 25-Jan-2022

Summary

Official Symbol
Ntaq1provided by RGD
Official Full Name
N-terminal glutamine amidase 1provided by RGD
Primary source
RGD:1311362
See related
Ensembl:ENSRNOG00000006700 AllianceGenome:RGD:1311362
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Wdyhv1; RGD1311362
Summary
Predicted to enable protein-N-terminal glutamine amidohydrolase activity. Predicted to be involved in cellular protein modification process. Predicted to be active in cytosol and nucleus. Orthologous to human NTAQ1 (N-terminal glutamine amidase 1). [provided by Alliance of Genome Resources, Nov 2021]
Expression
Biased expression in Heart (RPKM 50.1), Muscle (RPKM 49.4) and 9 other tissues See more
Orthologs
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Genomic context

See Ntaq1 in Genome Data Viewer
Location:
7q33
Exon count:
8
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (89684318..89704484)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (97957022..97977158, complement)

Chromosome 7 - NC_051342.1Genomic Context describing neighboring genes Neighboring gene similar to ribosomal protein S10 Neighboring gene ATPase family, AAA domain containing 2 Neighboring gene U7 small nuclear RNA Neighboring gene small nucleolar RNA SNORA11 Neighboring gene F-box protein 32 Neighboring gene uncharacterized LOC102549374

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Markers

Homology

Clone Names

  • MGC109256

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in cellular protein modification process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in cellular protein modification process ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular protein modification process ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
protein N-terminal glutamine amidohydrolase
Names
N-terminal Gln amidase
WDYHV motif containing 1
WDYHV motif-containing protein 1
nt(Q)-amidase
protein NH2-terminal glutamine deamidase
NP_001020195.1
XP_017450434.1
XP_017450436.1
XP_038935446.1
XP_038935447.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025024.2NP_001020195.1  protein N-terminal glutamine amidohydrolase

    See identical proteins and their annotated locations for NP_001020195.1

    Status: PROVISIONAL

    Source sequence(s)
    JACYVU010000185
    UniProtKB/Swiss-Prot
    Q5BJV9
    Related
    ENSRNOP00000008785.6, ENSRNOT00000008785.7
    Conserved Domains (1) summary
    pfam09764
    Location:25194
    Nt_Gln_amidase; N-terminal glutamine amidase

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051342.1 Reference mRatBN7.2 Primary Assembly

    Range
    89684318..89704484
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039079519.1XP_038935447.1  protein N-terminal glutamine amidohydrolase isoform X2

    Conserved Domains (1) summary
    pfam09764
    Location:25115
    Nt_Gln_amidase; N-terminal glutamine amidase
  2. XM_039079518.1XP_038935446.1  protein N-terminal glutamine amidohydrolase isoform X1

    Conserved Domains (1) summary
    pfam09764
    Location:25229
    Nt_Gln_amidase; N-terminal glutamine amidase
  3. XM_017594945.2XP_017450434.1  protein N-terminal glutamine amidohydrolase isoform X3

  4. XM_017594947.2XP_017450436.1  protein N-terminal glutamine amidohydrolase isoform X3

RNA

  1. XR_005486666.1 RNA Sequence

    Related
    ENSRNOT00000112943.1
  2. XR_005486667.1 RNA Sequence

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