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PVX_000955 lysine decarboxylase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 36410561, updated on 17-May-2024

Summary

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Gene symbol
PVX_000955
Gene description
lysine decarboxylase, putative
Primary source
PlasmoDB:PVX_000955
Locus tag
PVX_000955
See related
VEuPathDB:PVX_000955
Gene type
protein coding
RNA name
lysine decarboxylase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
Old locus tag
PVX_000720
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Genomic context

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See PVX_000955 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_009908.2 (173513..179695, complement)

Chromosome 3 - NC_009908.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene secy-independent transporter protein, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009908.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arginine decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arginine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysine decarboxylase, putative
XP_024586986.1
  • encoded by transcript PVX_000955A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009908.2 Reference assembly

    Range
    173513..179695 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024731164.1 → XP_024586986.1  lysine decarboxylase, putative [Plasmodium vivax]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9SJ27, A5KAN8
    Conserved Domains (3) summary
    cd00615
    Location:488 → 850
    Orn_deC_like; Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine ...
    pfam07218
    Location:1546 → 1716
    RAP1; Rhoptry-associated protein 1 (RAP-1)
    cl27246
    Location:1203 → 1267
    OKR_DC_1_C; Orn/Lys/Arg decarboxylase, C-terminal domain
Nucleotide Protein
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