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PVX_000970 hypothetical protein [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 36410563, updated on 17-May-2024

Summary

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Gene symbol
PVX_000970
Gene description
hypothetical protein
Primary source
PlasmoDB:PVX_000970
Locus tag
PVX_000970
See related
VEuPathDB:PVX_000970
Gene type
protein coding
RNA name
hypothetical protein, conserved
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
Old locus tag
PVX_000705
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Genomic context

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See PVX_000970 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_009908.2 (159088..168560)

Chromosome 3 - NC_009908.2Genomic Context describing neighboring genes Neighboring gene Plasmodium yoelii blood stage membrane protein ag-1, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene secy-independent transporter protein, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009908.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U1 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables U2 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables U5 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables U6 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pre-mRNA intronic binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal tri-snRNP complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U5 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_024586989.1
  • encoded by transcript PVX_000970A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009908.2 Reference assembly

    Range
    159088..168560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024731161.1 → XP_024586989.1  hypothetical protein, conserved [Plasmodium vivax]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S4HJX5, A5KAP1
    Conserved Domains (3) summary
    pfam07271
    Location:138 → 269
    Cytadhesin_P30; Cytadhesin P30/P32
    pfam07263
    Location:721 → 936
    DMP1; Dentin matrix protein 1 (DMP1)
    cl26804
    Location:374 → 3018
    PROCN; PROCN (NUC071) domain
Nucleotide Protein
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