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Rps27a-ps14 ribosomal protein S27a, pseudogene 14 [ Rattus norvegicus (Norway rat) ]

Gene ID: 364566, updated on 29-Feb-2024

Summary

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Official Symbol
Rps27a-ps14provided by RGD
Official Full Name
ribosomal protein S27a, pseudogene 14provided by RGD
Primary source
RGD:1561098
See related
AllianceGenome:RGD:1561098
Gene type
pseudo
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1561098
Summary
This locus was determined to be a processed pseudogene of Rps27a (GeneID: 100912032) since it has a similar nucleotide sequence to the coding region of the parental gene, but contains no intact open reading frame. Consistent with this locus being a processed pseudogene, it contains only exonic sequences relative to the parental gene, and has a polyA region in the genome at the 3' end of the gene. [provided by RefSeq, Apr 2015]
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Genomic context

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See Rps27a-ps14 in Genome Data Viewer
Location:
16p11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (36855702..36856230)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (31844939..31845467)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (35200428..35200956)

Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase-like 6 Neighboring gene myeloid-associated differentiation marker-like Neighboring gene U6atac minor spliceosomal RNA Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC134482370

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042114.1 

    Range
    101..629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086034.1 Reference GRCr8

    Range
    36855702..36856230
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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