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Krt82 keratin 82 [ Rattus norvegicus (Norway rat) ]

Gene ID: 366991, updated on 30-Sep-2021

Summary

Official Symbol
Krt82provided by RGD
Official Full Name
keratin 82provided by RGD
Primary source
RGD:1359276
See related
EnsemblRapid:ENSRNOG00000033403
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Kb22
Expression
Biased expression in Muscle (RPKM 2.3), Uterus (RPKM 0.3) and 2 other tissues See more
Orthologs
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Genomic context

See Krt82 in Genome Data Viewer
Location:
7q36
Exon count:
9
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (132665506..132675362, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (143196282..143206138, complement)

Chromosome 7 - NC_051342.1Genomic Context describing neighboring genes Neighboring gene keratin 85 Neighboring gene keratin 84 Neighboring gene type II keratin Kb15 Neighboring gene uncharacterized LOC108351555 Neighboring gene keratin 75

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in keratin filament ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
keratin, type II cuticular Hb2
Names
keratin 82, type II
type II keratin Kb22

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008803.1NP_001008803.1  keratin, type II cuticular Hb2

    See identical proteins and their annotated locations for NP_001008803.1

    Status: PROVISIONAL

    Source sequence(s)
    BK003979
    UniProtKB/TrEMBL
    A0A0G2QC61
    Related
    ENSRNOP00000035007.4, ENSRNOT00000029461.5
    Conserved Domains (3) summary
    pfam00038
    Location:95405
    Filament; Intermediate filament protein
    pfam16208
    Location:1891
    Keratin_2_head; Keratin type II head
    cl12057
    Location:302371
    Seryl_tRNA_N; Seryl-tRNA synthetase N-terminal domain

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051342.1 Reference mRatBN7.2 Primary Assembly

    Range
    132665506..132675362 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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