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His1:CG33855 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3771991, updated on 26-Apr-2024

Summary

Official Symbol
His1:CG33855provided by FlyBase
Primary source
FLYBASE:FBgn0053855
Locus tag
Dmel_CG33855
See related
AllianceGenome:FB:FBgn0053855
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG33855; Dmel\CG33855
Summary
Predicted to enable double-stranded DNA binding activity and nucleosomal DNA binding activity. Predicted to be involved in chromosome condensation; negative regulation of DNA recombination; and nucleosome positioning. Predicted to be located in chromatin. Predicted to be part of nucleosome. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
39E1-39E1; 2-54 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (21521616..21522638)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (21521616..21522638)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene histone H4 Neighboring gene histone H3 Neighboring gene histone H2B Neighboring gene histone H2A Neighboring gene small non-coding RNA 430q

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables chromatin DNA binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables double-stranded DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables nucleosomal DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in chromosome condensation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of DNA recombination IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of chromatin ISS
Inferred from Sequence or Structural Similarity
more info
 
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
histone H1
Names
CG33855-PA
His1:CG33855-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    21521616..21522638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001032198.2NP_001027369.1  histone H1 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001027369.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4AB54, Q5BI49
    Conserved Domains (1) summary
    pfam00538
    Location:46118
    Linker_histone; linker histone H1 and H5 family