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CG18170 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3772196, updated on 29-Dec-2023

Summary

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Official Symbol
CG18170provided by FlyBase
Primary source
FLYBASE:FBgn0035239
Locus tag
Dmel_CG18170
See related
AllianceGenome:FB:FBgn0035239
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG32316; Dmel\CG18170
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Genomic context

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Location:
62A7-62A8; 3-0.5 cM
Exon count:
12
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1602954..1617355)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1602954..1617355)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Transmembrane endosomal protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45814 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ATP binding cassette subfamily B member 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Prediction and verification of microRNA targets by MovingTargets, a highly adaptable prediction method. Burgler C, et al. BMC Genomics, 2005 Jun 8. PMID 15943864, Free PMC Article
  2. The Genetic Basis for Variation in Sensitivity to Lead Toxicity in Drosophila melanogaster. Zhou S, et al. Environ Health Perspect, 2016 Jul. PMID 26859824, Free PMC Article
  3. Identification of Drosophila Mutants Affecting Defense to an Entomopathogenic Fungus. Lu HL, et al. Sci Rep, 2015 Jul 23. PMID 26202798, Free PMC Article
  4. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
  5. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG18170-PA
CG18170-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    1602954..1617355
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001031927.2 → NP_001027098.1  uncharacterized protein Dmel_CG18170, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001027098.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q2MGL7
    Conserved Domains (1) summary
    pfam16078
    Location:50 → 82
    2-oxogl_dehyd_N; 2-oxoglutarate dehydrogenase N-terminus

  2. NM_001031926.2 → NP_001027097.1  uncharacterized protein Dmel_CG18170, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001027097.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q2MGL7
    Conserved Domains (1) summary
    pfam16078
    Location:50 → 82
    2-oxogl_dehyd_N; 2-oxoglutarate dehydrogenase N-terminus
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2MGL7 Q2MGL7

Gene LinkOut

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