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Zfp395 zinc finger protein 395 [ Mus musculus (house mouse) ]

Gene ID: 380912, updated on 23-Jun-2021

Summary

Official Symbol
Zfp395provided by MGI
Official Full Name
zinc finger protein 395provided by MGI
Primary source
MGI:MGI:2682318
See related
Ensembl:ENSMUSG00000034522
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm910; BC053701
Expression
Ubiquitous expression in limb E14.5 (RPKM 20.0), ovary adult (RPKM 19.7) and 28 other tissues See more
Orthologs
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Genomic context

See Zfp395 in Genome Data Viewer
Location:
14; 14 D1
Exon count:
11
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (65595796..65636379)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (65358676..65398930)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (65977513..66017767)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene frizzled class receptor 3 Neighboring gene predicted gene, 52141 Neighboring gene F-box protein 16 Neighboring gene predicted gene, 41178 Neighboring gene predicted gene, 48449 Neighboring gene prepronociceptin Neighboring gene RIKEN cDNA 9530047P18 gene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

General gene information

Homology

Clone Names

  • MGC60757

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in nuclear speck ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
zinc finger protein 395
Names
papillomavirus regulatory factor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199029.2NP_950194.2  zinc finger protein 395

    See identical proteins and their annotated locations for NP_950194.2

    Status: VALIDATED

    Source sequence(s)
    AC158983, AI425685, BY117447, BY780785, CF737135
    Consensus CDS
    CCDS49522.1
    UniProtKB/TrEMBL
    E9Q5N9
    Related
    ENSMUSP00000064422.7, ENSMUST00000066994.7
    Conserved Domains (1) summary
    pfam15997
    Location:4110
    DUF4772; Domain of unknown function (DUF4772)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    65595796..65636379
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036158689.1XP_036014582.1  zinc finger protein 395 isoform X1

    Conserved Domains (1) summary
    pfam15997
    Location:4110
    DUF4772; Domain of unknown function (DUF4772)
  2. XM_011245097.3XP_011243399.1  zinc finger protein 395 isoform X1

    See identical proteins and their annotated locations for XP_011243399.1

    UniProtKB/TrEMBL
    E9Q5N9
    Conserved Domains (1) summary
    pfam15997
    Location:4110
    DUF4772; Domain of unknown function (DUF4772)
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