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Gm5197 predicted gene 5197 [ Mus musculus (house mouse) ]

Gene ID: 382780, updated on 8-Feb-2024

Summary

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Official Symbol
Gm5197provided by MGI
Official Full Name
predicted gene 5197provided by MGI
Gene description
thymine DNA glycosylase pseudogene
Primary source
MGI:MGI:3779472
See related
AllianceGenome:MGI:3779472
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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Location:
13 C2; 13 41.79 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (80246577..80247642, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (80098458..80099523, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 24863 Neighboring gene STARR-seq mESC enhancer starr_35096 Neighboring gene STARR-seq mESC enhancer starr_35100 Neighboring gene predicted gene, 19320 Neighboring gene STARR-seq mESC enhancer starr_35101 Neighboring gene STARR-seq mESC enhancer starr_35102 Neighboring gene predicted gene, 24635 Neighboring gene ribosomal protein L17 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • thymine DNA glycosylase pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_019424.2 

    Range
    101..1166
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    80246577..80247642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.