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Mirlet7a-1 microRNA let7a-1 [ Mus musculus (house mouse) ]

Gene ID: 387244, updated on 8-Feb-2024

Summary

Official Symbol
Mirlet7a-1provided by MGI
Official Full Name
microRNA let7a-1provided by MGI
Primary source
MGI:MGI:2676793
See related
Ensembl:ENSMUSG00000065421 miRBase:MI0000556; AllianceGenome:MGI:2676793
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Let-7a; let-7a-1; Mirnlet7a; Mirnlet7a-1
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See Mirlet7a-1 in Genome Data Viewer
Location:
13; 13 A5
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (48691655..48691748, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (48538179..48538272, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 6720427I07 gene Neighboring gene microRNA let7f-1 Neighboring gene microRNA let7d Neighboring gene STARR-positive B cell enhancer ABC_E1876 Neighboring gene STARR-positive B cell enhancer ABC_E1164 Neighboring gene STARR-seq mESC enhancer starr_34462 Neighboring gene STARR-seq mESC enhancer starr_34463 Neighboring gene STARR-positive B cell enhancer ABC_E5395 Neighboring gene predicted gene, 25232 Neighboring gene protein tyrosine phosphatase domain containing 1 Neighboring gene predicted gene, 36550

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Other Names

  • mmu-let-7a-1

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
part_of RISC complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_029725.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC147162
    Related
    ENSMUST00000083487.5

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    48691655..48691748 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)