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NCU03794 periodic tryptophan protein 2 [ Neurospora crassa OR74A ]

Gene ID: 3877368, updated on 16-Nov-2023

Summary

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Gene symbol
NCU03794
Gene description
periodic tryptophan protein 2
Locus tag
NCU03794
Gene type
protein coding
RNA name
periodic tryptophan protein 2
RefSeq status
PROVISIONAL
Organism
Neurospora crassa OR74A (strain: OR74A)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora
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Genomic context

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Location:
other: V
Exon count:
2
Sequence:
Chromosome: V; NC_026505.1 (2436883..2439993, complement)

Linkage Group V - NC_026505.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene inositol polyphosphate phosphatase Neighboring gene hypothetical protein Neighboring gene cell division control protein 12 Neighboring gene serine/threonine protein kinase-24

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026505.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of the filamentous fungus Neurospora crassa. Galagan JE, et al. Nature, 2003 Apr 24. PMID 12712197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Pwp2p-containing subcomplex of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
periodic tryptophan protein 2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_026505.1 Reference assembly

    Range
    2436883..2439993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_956090.2 → XP_961183.1  periodic tryptophan protein 2 [Neurospora crassa OR74A]

    See identical proteins and their annotated locations for XP_961183.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q7RVU5, Q9C270
    UniProtKB/TrEMBL
    A0A0B0EC18
    Conserved Domains (5) summary
    COG2319
    Location:137 → 605
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:144 → 495
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam04003
    Location:741 → 843
    Utp12; Dip2/Utp12 Family
    sd00039
    Location:99 → 149
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:336 → 701
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C270.1

Gene LinkOut

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Molecular Biology Databases