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pabir3 PABIR family member 3 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 394909, updated on 11-Nov-2023

Summary

Official Symbol
pabir3provided by Xenbase
Official Full Name
PABIR family member 3provided by Xenbase
Primary source
Xenbase:XB-GENE-5834119
See related
Ensembl:ENSXETG00000019765
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
fam122a; fam122c
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Genomic context

Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (68558632..68575593)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (47452483..47469477)

Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U109 Neighboring gene PABIR family member 2 Neighboring gene small nucleolar RNA U109 Neighboring gene uncharacterized LOC108648354 Neighboring gene uncharacterized XB5949753 Neighboring gene motile sperm domain containing 1

Genomic regions, transcripts, and products

General protein information

Preferred Names
uncharacterized protein LOC394909
Names
family with sequence similarity 122A
family with sequence similarity 122C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_203960.1NP_989291.1  uncharacterized protein LOC394909

    See identical proteins and their annotated locations for NP_989291.1

    Status: PREDICTED

    Source sequence(s)
    BC064161
    UniProtKB/TrEMBL
    A0A6I8SBW9, Q6P372
    Related
    ENSXETP00000091093.2, ENSXETT00000084224.2

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    68558632..68575593
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012968167.3XP_012823621.1  uncharacterized protein LOC394909 isoform X1

    UniProtKB/TrEMBL
    A0A6I8SBW9, A0A8J0SKI8
    Related
    ENSXETP00000042787.4, ENSXETT00000042787.5