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polr3f polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 394944, updated on 5-Mar-2024

Summary

Official Symbol
polr3fprovided by Xenbase
Official Full Name
polymerase (RNA) III (DNA directed) polypeptide F, 39 kDaprovided by Xenbase
Primary source
Xenbase:XB-GENE-974790
See related
Ensembl:ENSXETG00000024898
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
RPC39
Orthologs
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Genomic context

Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (38389017..38398159)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (38710387..38719511)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene lysine acetyltransferase 14 Neighboring gene double zinc ribbon and ankyrin repeat domains 1 Neighboring gene MER proto-oncogene, tyrosine kinase Neighboring gene transmembrane protein 87B

Genomic regions, transcripts, and products

General protein information

Preferred Names
DNA-directed RNA polymerase III subunit RPC6
NP_989319.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_203988.1NP_989319.1  DNA-directed RNA polymerase III subunit RPC6

    See identical proteins and their annotated locations for NP_989319.1

    Status: PROVISIONAL

    Source sequence(s)
    BC064209
    UniProtKB/TrEMBL
    A0A6I8R999, F7BLB0, Q6P325
    Related
    ENSXETP00000053524.2, ENSXETT00000053524.4
    Conserved Domains (1) summary
    pfam05158
    Location:1313
    RNA_pol_Rpc34; RNA polymerase Rpc34 subunit

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    38389017..38398159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)