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COL14A1 collagen type XIV alpha 1 chain [ Gallus gallus (chicken) ]

Gene ID: 396276, updated on 14-Feb-2019

Summary

Symbol
COL14A1provided by CGNC
Full Name
collagen type XIV alpha 1 chainprovided by CGNC
Primary source
CGNC:12285
See related
Ensembl:ENSGALG00000037675
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
COL14
Orthologs

Genomic context

See COL14A1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
48
Annotation release Status Assembly Chr Location
104 current GRCg6a (GCF_000002315.5) 2 NC_006089.5 (136788122..136908061)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 2 NC_006089.4 (136894050..137014132)
102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 2 NC_006089.3 (136370296..136490378)

Chromosome 2 - NC_006089.5Genomic Context describing neighboring genes Neighboring gene DEP domain containing 6 Neighboring gene uncharacterized LOC107052786 Neighboring gene mitochondrial ribosomal protein L13 Neighboring gene MDM2 binding protein

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
cell adhesion IEA
Inferred from Electronic Annotation
more info
 
growth plate cartilage chondrocyte morphogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
collagen trimer IEA
Inferred from Electronic Annotation
more info
 
collagen-containing extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
collagen alpha-1(XIV) chain
Names
alpha1 (XIV) collagen
collagen XIV
collagen type XIV/undulin
collagen, type XIV, alpha 1 (undulin)
undulin

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_205334.1NP_990665.1  collagen alpha-1(XIV) chain precursor

    See identical proteins and their annotated locations for NP_990665.1

    Status: PROVISIONAL

    Source sequence(s)
    X70793
    UniProtKB/Swiss-Prot
    P32018
    Related
    ENSGALP00000051955.2, ENSGALT00000077257.3
    Conserved Domains (6) summary
    pfam01391
    Location:15281610
    Collagen; Collagen triple helix repeat (20 copies)
    smart00060
    Location:447516
    FN3; Fibronectin type 3 domain
    smart00210
    Location:12391434
    TSPN; Thrombospondin N-terminal -like domains
    cd00063
    Location:536621
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd01482
    Location:157320
    vWA_collagen_alphaI-XII-like; Collagen: The extracellular matrix represents a complex alloy of variable members of diverse protein families defining structural integrity and various physiological functions. The most abundant family is the collagens with more than 20 different ...
    pfam00041
    Location:625696
    fn3; Fibronectin type III domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCg6a Primary Assembly

Genomic

  1. NC_006089.5 Reference GRCg6a Primary Assembly

    Range
    136788122..136908061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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