SDC3 syndecan 3 [Gallus gallus (chicken)] - Gene

Summary

Symbol: SDC3provided by CGNC
Full Name: syndecan 3provided by CGNC
Primary source: CGNC:354
See related: Ensembl:ENSGALG00010013435
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as: syndecan-3
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 23

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	23	NC_052554.1 (809205..831909, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	23	NC_052595.1 (575794..598490, complement)

Chromosome 23 - NC_052554.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Indian hedgehog and syndecan-3 have roles in chondrocyte proliferation and limb skeletogenesis
Title: Indian hedgehog and syndecans-3 coregulate chondrocyte proliferation and function during chick limb skeletogenesis.

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General gene information

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Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in cell migration	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cell surface	IEA Inferred from Electronic Annotation more info	PubMed
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: syndecan-3

Names: syndecan 3 (N-syndecan); syndecan-3 proteoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_205383.2 → NP_990714.2 syndecan-3 precursor

Status: PROVISIONAL

Source sequence(s)

JAENSK010000339

UniProtKB/Swiss-Prot

P26261

UniProtKB/TrEMBL

A0A8V0YJY9

Related

ENSGALP00010019127.1, ENSGALT00010032350.1

Conserved Domains (1) summary

smart00294
Location:371 → 389

4.1m; putative band 4.1 homologues' binding motif

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

809205..831909 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040651633.2 → XP_040507567.1 syndecan-3 isoform X1

UniProtKB/TrEMBL

A0A8V0YMH2

Related

ENSGALP00010019126.1, ENSGALT00010032348.1

Conserved Domains (1) summary

smart00294
Location:357 → 375

4.1m; putative band 4.1 homologues' binding motif