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TPI1 triosephosphate isomerase 1 [ Gallus gallus (chicken) ]

Gene ID: 396435, updated on 14-Feb-2019

Summary

Symbol
TPI1provided by CGNC
Full Name
triosephosphate isomerase 1provided by CGNC
Primary source
CGNC:49803
See related
Ensembl:ENSGALG00000014526
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
TIM
Orthologs

Genomic context

See TPI1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
104 current GRCg6a (GCF_000002315.5) 1 NC_006088.5 (77940690..77943689)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 1 NC_006088.4 (77274758..77277757)
102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 1 NC_006088.3 (76754054..76757054)

Chromosome 1 - NC_006088.5Genomic Context describing neighboring genes Neighboring gene cell division cycle associated 3 Neighboring gene ubiquitin specific peptidase 5 Neighboring gene leucine rich repeat containing 23 Neighboring gene enolase 2

Genomic regions, transcripts, and products

Bibliography

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
methylglyoxal synthase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
protein homodimerization activity ISS
Inferred from Sequence or Structural Similarity
more info
 
triose-phosphate isomerase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
triose-phosphate isomerase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
gluconeogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 
gluconeogenesis TAS
Traceable Author Statement
more info
 
glyceraldehyde-3-phosphate biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
glyceraldehyde-3-phosphate biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
glycerol catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
glycolytic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
glycolytic process IEA
Inferred from Electronic Annotation
more info
 
glycolytic process TAS
Traceable Author Statement
more info
 
methylglyoxal biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytosol TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
triosephosphate isomerase
Names
methylglyoxal synthase
triose-phosphate isomerase
triosephosphate isomerase (TIM, D-glyceraldehyde 3-phosphate ketol-isomerase)
NP_990782.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_205451.1NP_990782.1  triosephosphate isomerase

    See identical proteins and their annotated locations for NP_990782.1

    Status: PROVISIONAL

    Source sequence(s)
    M11314
    UniProtKB/Swiss-Prot
    P00940
    Related
    ENSGALP00000023396.2, ENSGALT00000023442.4
    Conserved Domains (1) summary
    PTZ00333
    Location:1246
    PTZ00333; triosephosphate isomerase; Provisional

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCg6a Primary Assembly

Genomic

  1. NC_006088.5 Reference GRCg6a Primary Assembly

    Range
    77940690..77943689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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