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TTPA alpha tocopherol transfer protein [ Canis lupus familiaris (dog) ]

Gene ID: 403627, updated on 28-Sep-2021

Summary

Official Symbol
TTPAprovided by VGNC
Official Full Name
alpha tocopherol transfer proteinprovided by VGNC
Primary source
VGNC:VGNC:47981
See related
EnsemblRapid:ENSCAFG00845029838
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See TTPA in Genome Data Viewer
Location:
chromosome: 29
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 29 NC_051833.1 (13283050..13302075, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 29 NC_006611.4 (13507263..13526254, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 29 NC_049250.1 (13677780..13696792, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 29 NC_049289.1 (13294501..13313489, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 29 NC_049770.1 (13412121..13431143, complement)
105 previous assembly CanFam3.1 (GCF_000002285.3) 29 NC_006611.3 (13177690..13198910, complement)

Chromosome 29 - NC_051833.1Genomic Context describing neighboring genes Neighboring gene sodium/potassium transporting ATPase interacting 3 Neighboring gene uncharacterized LOC102153247 Neighboring gene uncharacterized LOC111093132 Neighboring gene gamma-glutamyl hydrolase Neighboring gene YTH N6-methyladenosine RNA binding protein 3 Neighboring gene uncharacterized LOC111093147

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
alpha-tocopherol transfer protein
Names
alpha-TTP
tocopherol (alpha) transfer protein (ataxia (Friedreich-like) with vitamin E deficiency)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051833.1 Reference ROS_Cfam_1.0

    Range
    13283050..13302075 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038441245.1XP_038297173.1  alpha-tocopherol transfer protein

    Related
    ENSCAFP00845041480.1, ENSCAFT00845052835.1
    Conserved Domains (2) summary
    smart01100
    Location:4773
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam00650
    Location:99247
    CRAL_TRIO; CRAL/TRIO domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049289.1 Alternate UMICH_Zoey_3.1

    Range
    13294501..13313489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038515823.1XP_038371751.1  alpha-tocopherol transfer protein

    Conserved Domains (2) summary
    smart01100
    Location:4773
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam00650
    Location:99247
    CRAL_TRIO; CRAL/TRIO domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049770.1 Alternate UNSW_CanFamBas_1.0

    Range
    13412121..13431143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038643633.1XP_038499561.1  alpha-tocopherol transfer protein

    Conserved Domains (2) summary
    smart01100
    Location:4773
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam00650
    Location:99247
    CRAL_TRIO; CRAL/TRIO domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049250.1 Alternate UU_Cfam_GSD_1.0

    Range
    13677780..13696792 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038579384.1XP_038435312.1  alpha-tocopherol transfer protein

    Conserved Domains (2) summary
    smart01100
    Location:4773
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam00650
    Location:99247
    CRAL_TRIO; CRAL/TRIO domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006611.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    13507263..13526254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038460904.1XP_038316832.1  alpha-tocopherol transfer protein

    Conserved Domains (2) summary
    smart01100
    Location:4773
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam00650
    Location:99247
    CRAL_TRIO; CRAL/TRIO domain
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