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APOH apolipoprotein H [ Canis lupus familiaris (dog) ]

Gene ID: 403945, updated on 4-Apr-2024

Summary

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Official Symbol
APOHprovided by VGNC
Official Full Name
apolipoprotein Hprovided by VGNC
Primary source
VGNC:VGNC:38004
See related
Ensembl:ENSCAFG00845028150
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (15744714..15757283)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (14976443..14988978)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (12830254..12842800, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (14691324..14703853)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (12829414..12841962, complement)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene protein kinase C alpha Neighboring gene alanine and glycine-rich protein-like Neighboring gene uncharacterized LOC119873256 Neighboring gene centrosomal protein 112 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC111097327

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evaluation of the APOH gene as a positional candidate for prcd in dogs. Gu W, et al. Invest Ophthalmol Vis Sci, 1999 May. PMID 10235557
  2. Characterization and acute phase modulation of canine apolipoprotein H (beta 2-glycoprotein I). Sellar GC, et al. Biochem Biophys Res Commun, 1993 Mar 31. PMID 7682067

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
beta-2-glycoprotein 1
Names
B2GPI
apo-H
beta(2)GPI
beta-2-glycoprotein I

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003265.2 → NP_001003265.1  beta-2-glycoprotein 1 precursor

    See identical proteins and their annotated locations for NP_001003265.1

    Status: PROVISIONAL

    Source sequence(s)
    X72933
    UniProtKB/Swiss-Prot
    P33703
    UniProtKB/TrEMBL
    A0A8C0LLF4, A0A8C0LW15
    Related
    ENSCAFP00845038964.1, ENSCAFT00845049681.1
    Conserved Domains (2) summary
    pfam09014
    Location:261 → 345
    Sushi_2; Beta-2-glycoprotein-1 fifth domain
    cl27761
    Location:41 → 260
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    15744714..15757283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    14691324..14703853
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    12829414..12841962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    12830254..12842800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    14976443..14988978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P33703.1 GenPept UniProtKB/Swiss-Prot:P33703

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