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FK796_gp36 ORF57+58 [ white sturgeon herpesvirus 2 ]

Gene ID: 40524642, updated on 27-Feb-2024

Summary

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Gene symbol
FK796_gp36
Gene description
ORF57+58
Locus tag
FK796_gp36
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
white sturgeon herpesvirus 2 (strain: SRWSHV (Snake River White Sturgeon Herpesvirus), acronym: AciHV-2, nat-host: white sturgeon)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Alloherpesviridae; Ictavirus; Ictavirus acipenseridallo2
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Genomic context

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Sequence:
NC_043042.1 (40279..44897)

NC_043042.1Genomic Context describing neighboring genes Neighboring gene ORF55 Neighboring gene ORF56 Neighboring gene ORF59 Neighboring gene ORF60 Neighboring gene ORF61 Neighboring gene ORF62

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_043042.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular confirmation of a new herpesvirus from catfish (Ameiurus melas) by testing the performance of a novel PCR method, designed to target the DNA polymerase gene of alloherpesviruses. Doszpoly A, et al. Arch Virol, 2008. PMID 18972184
  2. Comparative analysis of a conserved gene block from the genome of the members of the genus ictalurivirus. Doszpoly A, et al. Intervirology, 2011. PMID 21228534
  3. Partial genome characterization of acipenserid herpesvirus 2: taxonomical proposal for the demarcation of three subfamilies in Alloherpesviridae. Doszpoly A, et al. Arch Virol, 2011 Dec. PMID 21935624

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
ORF57+58
YP_009664599.1
  • conserved in IcHV-1, IcHV-2; AciHV-1, AngHV-1, RaHV-1, RaHV-2; CyHV-1, CyHV-2, CyHV-3, SalHV-1, SalHV-2 and SalHV-3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_043042.1 Reference assembly

    Range
    40279..44897
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009664599.1 ORF57+58 [white sturgeon herpesvirus 2]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D5FM41
    Conserved Domains (1) summary
    PHA03334
    Location:24 → 1507
    PHA03334; putative DNA polymerase catalytic subunit; Provisional
Protein Accession Links
GenPept Link UniProtKB Link
ACZ55868.2

Gene LinkOut

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