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aldoab aldolase a, fructose-bisphosphate, b [ Danio rerio (zebrafish) ]

Gene ID: 406496, updated on 27-Mar-2024

Summary

Official Symbol
aldoabprovided by ZNC
Official Full Name
aldolase a, fructose-bisphosphate, bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-2299
See related
Ensembl:ENSDARG00000034470 AllianceGenome:ZFIN:ZDB-GENE-040426-2299
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:77696; hm:zeh0036
Summary
Predicted to enable fructose-bisphosphate aldolase activity. Predicted to be involved in fructose 1,6-bisphosphate metabolic process and glycolytic process. Predicted to be active in cytosol. Is expressed in adaxial cell; cardiovascular system; fin; musculature system; and somite. Orthologous to human ALDOA (aldolase, fructose-bisphosphate A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (4052180..4069833, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (4015415..4033068, complement)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene si:ch211-180a12.2 Neighboring gene zgc:123217 Neighboring gene integrin alpha-X-like Neighboring gene integrin, alpha M (complement component 3 receptor 3 subunit), tandem duplicate 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables fructose-bisphosphate aldolase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables fructose-bisphosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in fructose 1,6-bisphosphate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in glycolytic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within glycolytic process IEA
Inferred from Electronic Annotation
more info
 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
aldolase a, fructose-bisphosphate, b
NP_998380.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_213215.1NP_998380.1  aldolase a, fructose-bisphosphate, b

    See identical proteins and their annotated locations for NP_998380.1

    Status: PROVISIONAL

    Source sequence(s)
    BC065847
    UniProtKB/TrEMBL
    A0A8M1PGK6, Q6P043
    Related
    ENSDARP00000042199.3, ENSDART00000042200.4
    Conserved Domains (1) summary
    pfam00274
    Location:15364
    Glycolytic; Fructose-bisphosphate aldolase class-I

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    4052180..4069833 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)