calm1a calmodulin 1a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: calm1aprovided by ZNC
Official Full Name: calmodulin 1aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-8308
See related: Ensembl:ENSDARG00000021811 AllianceGenome:ZFIN:ZDB-GENE-030131-8308
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: CaMbeta; sb:cb617; zgc:63926; wu:fb08d09; wu:fb69c08; wu:fj34a08
Summary: Acts upstream of or within midbrain-hindbrain boundary morphogenesis. Is expressed in several structures, including mesoderm; midbrain neural keel; nervous system; neural tube; and trigeminal placode. Human ortholog(s) of this gene implicated in catecholaminergic polymorphic ventricular tachycardia 4 and long QT syndrome 14. Orthologous to human CALM1 (calmodulin 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 17

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	17	NC_007128.7 (26713111..26720972, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	17	NC_007128.6 (26694720..26702581, complement)

Chromosome 17 - NC_007128.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fb08d09.x1 (e-PCR)
- UniSTS:202754

fb69c08.x1 (e-PCR)
- UniSTS:190987

fb69c08 (e-PCR)
- UniSTS:187349

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within midbrain-hindbrain boundary morphogenesis	IMP Inferred from Mutant Phenotype more info	PubMed

General protein information

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Preferred Names: calmodulin-1a

Names: CALMx2

NP_998516.1

EC 2.7.11.19

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.