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Smim31 small integral membrane protein 31 [ Mus musculus (house mouse) ]

Gene ID: 407795, updated on 5-Mar-2024

Summary

Official Symbol
Smim31provided by MGI
Official Full Name
small integral membrane protein 31provided by MGI
Primary source
MGI:MGI:3039572
See related
Ensembl:ENSMUSG00000074300 AllianceGenome:MGI:3039572
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EPR
Summary
Located in axon. Orthologous to human SMIM31 (small integral membrane protein 31). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in colon adult (RPKM 2.9), large intestine adult (RPKM 2.9) and 4 other tissues See more
Orthologs
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Genomic context

Location:
8 B3.1; 8 32.55 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (65538265..65582215, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (65085613..65129563, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_21646 Neighboring gene apelin receptor early endogenous ligand Neighboring gene STARR-seq mESC enhancer starr_21647 Neighboring gene STARR-seq mESC enhancer starr_21648 Neighboring gene predicted gene, 39183 Neighboring gene STARR-seq mESC enhancer starr_21650 Neighboring gene STARR-seq mESC enhancer starr_21651 Neighboring gene predicted gene 45445 Neighboring gene predicted gene, 48810 Neighboring gene predicted gene, 39184 Neighboring gene tubulin, alpha 1B pseudogene Neighboring gene STARR-seq mESC enhancer starr_21652 Neighboring gene STARR-seq mESC enhancer starr_21653 Neighboring gene 40S ribosomal protein S25 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General protein information

Preferred Names
small integral membrane protein 31
Names
epithelial cell program regulator

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001352886.1NP_001339815.1  small integral membrane protein 31

    Status: VALIDATED

    Source sequence(s)
    AC102287, AK131860, BC030870
    Consensus CDS
    CCDS90402.1
    UniProtKB/Swiss-Prot
    Q3V2G4
    Related
    ENSMUSP00000147515.2, ENSMUST00000098713.5

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    65538265..65582215 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)