cap1 cyclase associated actin cytoskeleton regulatory protein 1 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: cap1provided by Xenbase
Official Full Name: cyclase associated actin cytoskeleton regulatory protein 1provided by Xenbase
Primary source: Xenbase:XB-GENE-5929502
See related: Ensembl:ENSXETG00000001184
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: cap; xcap1; cap1-pen
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	2	NC_030678.2 (90819597..90836749, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	2	NC_030678.1 (86696595..86712261, complement)

Chromosome 2 - NC_030678.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables actin binding	IBA Inferred from Biological aspect of Ancestor more info
enables actin binding	IEA Inferred from Electronic Annotation more info
enables adenylate cyclase binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in actin filament organization	IBA Inferred from Biological aspect of Ancestor more info
involved_in cAMP-mediated signaling	IBA Inferred from Biological aspect of Ancestor more info
involved_in cell morphogenesis	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within cytoskeleton organization	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: adenylyl cyclase-associated protein 1

Names: CAP, adenylate cyclase-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001001239.2 → NP_001001239.1 adenylyl cyclase-associated protein 1

See identical proteins and their annotated locations for NP_001001239.1

Status: PROVISIONAL

Source sequence(s)

BC067981

UniProtKB/TrEMBL

A0A803KIM2, F6R8U6, Q6NVM4

Related

ENSXETP00000031000.4, ENSXETT00000031000.5

Conserved Domains (2) summary

pfam01213
Location:6 → 291

CAP_N; Adenylate cyclase associated (CAP) N terminal

pfam08603
Location:318 → 473

CAP_C; Adenylate cyclase associated (CAP) C terminal

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

90819597..90836749 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_012956688.3 → XP_012812142.1 adenylyl cyclase-associated protein 1 isoform X1

See identical proteins and their annotated locations for XP_012812142.1

UniProtKB/TrEMBL

A0A803KIM2, F6R8U6, Q6NVM4

Conserved Domains (2) summary

pfam01213
Location:6 → 291

CAP_N; Adenylate cyclase associated (CAP) N terminal

pfam08603
Location:318 → 473

CAP_C; Adenylate cyclase associated (CAP) C terminal