Format

Send to:

Choose Destination

BC048507 cDNA sequence BC048507 [ Mus musculus (house mouse) ]

Gene ID: 408058, updated on 8-Jul-2021

Summary

Official Symbol
BC048507provided by MGI
Official Full Name
cDNA sequence BC048507provided by MGI
Primary source
MGI:MGI:3040680
See related
Ensembl:ENSMUSG00000064063
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See BC048507 in Genome Data Viewer
Location:
13; 13 B3
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (68011445..68012042)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (67863326..67863923)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (67964274..67964854)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930525G20 gene Neighboring gene zinc finger protein 273 Neighboring gene predicted gene 10037 Neighboring gene predicted gene 7969 Neighboring gene up-regulated in Myc liver

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables dynein intermediate chain binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables dynein light intermediate chain binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables enzyme binding ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables nitric-oxide synthase regulator activity ISO
Inferred from Sequence Orthology
more info
 
enables protein-containing complex binding ISO
Inferred from Sequence Orthology
more info
 
enables scaffold protein binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in negative regulation of phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of insulin secretion involved in cellular response to glucose stimulus ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of COP9 signalosome ISO
Inferred from Sequence Orthology
more info
 
located_in axon cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in centrosome ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
part_of cytoplasmic dynein complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of cytoplasmic dynein complex ISO
Inferred from Sequence Orthology
more info
 
part_of dynein complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in kinetochore ISO
Inferred from Sequence Orthology
more info
 
colocalizes_with mitochondrion ISO
Inferred from Sequence Orthology
more info
 
located_in mitotic spindle ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in secretory granule ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
dynein light chain LC8-type 1-like

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001185.3NP_001001185.1  dynein light chain LC8-type 1-like

    See identical proteins and their annotated locations for NP_001001185.1

    Status: VALIDATED

    Source sequence(s)
    AK133011
    Consensus CDS
    CCDS36718.1
    UniProtKB/TrEMBL
    Q80ZS7
    Related
    ENSMUSP00000077564.6, ENSMUST00000078471.7
    Conserved Domains (1) summary
    cl03131
    Location:189
    Dynein_light; Dynein light chain type 1

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    68011445..68012042
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center