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SFXN1 sideroflexin 1 [ Gallus gallus (chicken) ]

Gene ID: 416221, updated on 16-Apr-2021

Summary

Symbol
SFXN1provided by CGNC
Full Name
sideroflexin 1provided by CGNC
Primary source
CGNC:2371
See related
Ensembl:ENSGALG00000033956
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See SFXN1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
13
Annotation release Status Assembly Chr Location
105 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (9634402..9669465)
105 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.1) 13 NC_052585.1 (9654933..9675288)
104 previous assembly GRCg6a (GCF_000002315.5) 13 NC_006100.5 (10739290..10774391)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 13 NC_006100.4 (10036480..10056812)

Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene msh homeobox 2 Neighboring gene uncharacterized LOC107054519 Neighboring gene uncharacterized LOC121106691 Neighboring gene dopamine receptor D1 Neighboring gene kinesin family member 20A Neighboring gene bromodomain containing 8 Neighboring gene NHP2 ribonucleoprotein

Genomic regions, transcripts, and products

General gene information

Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001277743.1NP_001264672.1  sideroflexin-1

    Status: VALIDATED

    Source sequence(s)
    AJ396734, CN235276, CV854486, DR410950
    Related
    ENSGALP00000064594.2, ENSGALT00000087698.2
    Conserved Domains (1) summary
    pfam03820
    Location:16322
    Mtc; Tricarboxylate carrier

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    9634402..9669465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025154842.2XP_025010610.2  sideroflexin-1 isoform X1

  2. XM_040646893.1XP_040502827.1  sideroflexin-1 isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    9654933..9675288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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