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CANX calnexin [ Gallus gallus (chicken) ]

Gene ID: 416288, updated on 23-Sep-2021

Summary

Symbol
CANXprovided by CGNC
Full Name
calnexinprovided by CGNC
Primary source
CGNC:4443
See related
Ensembl:ENSGALG00000032148
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See CANX in Genome Data Viewer
Location:
chromosome: 13
Exon count:
16
Annotation release Status Assembly Chr Location
105 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (13140772..13158540, complement)
105 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.1) 13 NC_052585.1 (13155750..13172520, complement)
104 previous assembly GRCg6a (GCF_000002315.5) 13 NC_006100.5 (14242224..14260009, complement)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 13 NC_006100.4 (13538111..13555923, complement)

Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene leukotriene C4 synthase Neighboring gene mastermind like transcriptional coactivator 1 Neighboring gene uncharacterized LOC121106739 Neighboring gene leukotriene C4 synthase

Genomic regions, transcripts, and products

General gene information

Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030620.2NP_001025791.2  calnexin precursor

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000256
    UniProtKB/TrEMBL
    A0A1D5PF08, Q5ZMF5
    Related
    ENSGALP00000051370.1, ENSGALT00000078423.2
    Conserved Domains (1) summary
    pfam00262
    Location:74443
    Calreticulin; Calreticulin family

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    13140772..13158540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015293792.3XP_015149278.1  calnexin isoform X1

    UniProtKB/TrEMBL
    A0A1D5PF08
    Conserved Domains (1) summary
    pfam00262
    Location:74443
    Calreticulin; Calreticulin family
  2. XM_040646911.1XP_040502845.1  calnexin isoform X1

    Conserved Domains (1) summary
    pfam00262
    Location:74443
    Calreticulin; Calreticulin family

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    13155750..13172520 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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