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PDXDC1 pyridoxal dependent decarboxylase domain containing 1 [ Gallus gallus (chicken) ]

Gene ID: 416413, updated on 14-Aug-2021

Summary

Symbol
PDXDC1provided by CGNC
Full Name
pyridoxal dependent decarboxylase domain containing 1provided by CGNC
Primary source
CGNC:50246
See related
Ensembl:ENSGALG00000034829
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See PDXDC1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
24
Annotation release Status Assembly Chr Location
105 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (55348..82345)
105 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.1) 14 NC_052586.1 (57550..84542)
104 previous assembly GRCg6a (GCF_000002315.5) 14 NC_006101.5 (448574..477122)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 14 NC_006101.4 (45267..74971)

Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106791 Neighboring gene uncharacterized LOC107054589 Neighboring gene N-terminal asparagine amidase Neighboring gene RRN3 homolog, RNA polymerase I transcription factor

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
pyridoxal-dependent decarboxylase domain-containing protein 1
XP_004945124.1
XP_004945125.1
XP_015149782.1
XP_040503596.1
XP_040503597.1
XP_040539792.1
XP_040539793.1
XP_040539794.1
XP_040539795.1
XP_040539796.1
XP_040539797.1
XP_414728.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    55348..82345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_414728.6XP_414728.2  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X2

    Related
    ENSGALP00000057734.3
    Conserved Domains (1) summary
    cl18945
    Location:172404
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
  2. XM_040647662.1XP_040503596.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X4

    Conserved Domains (1) summary
    cl18945
    Location:172404
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
  3. XM_040647663.1XP_040503597.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X6

    Conserved Domains (1) summary
    cl18945
    Location:172404
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
  4. XM_004945067.4XP_004945124.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X1

    Conserved Domains (1) summary
    cl18945
    Location:173405
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
  5. XM_004945068.4XP_004945125.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X3

    Conserved Domains (1) summary
    cl18945
    Location:173405
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
  6. XM_015294296.3XP_015149782.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X5

    Conserved Domains (1) summary
    cl18945
    Location:173405
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

RNA

  1. XR_001468986.3 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    57550..84542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040683859.1XP_040539793.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X2

    Conserved Domains (1) summary
    cl18945
    Location:172404
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
  2. XM_040683861.1XP_040539795.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X4

    Conserved Domains (1) summary
    cl18945
    Location:172404
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
  3. XM_040683863.1XP_040539797.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X6

    Conserved Domains (1) summary
    cl18945
    Location:172404
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
  4. XM_040683858.1XP_040539792.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X1

    Conserved Domains (1) summary
    cl18945
    Location:173405
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
  5. XM_040683860.1XP_040539794.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X3

    Conserved Domains (1) summary
    cl18945
    Location:173405
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
  6. XM_040683862.1XP_040539796.1  pyridoxal-dependent decarboxylase domain-containing protein 1 isoform X5

    Conserved Domains (1) summary
    cl18945
    Location:173405
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

RNA

  1. XR_005854199.1 RNA Sequence

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