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RFX4 regulatory factor X4 [ Gallus gallus (chicken) ]

Gene ID: 418070, updated on 5-Mar-2024

Summary

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Symbol
RFX4provided by CGNC
Full Name
regulatory factor X4provided by CGNC
Primary source
CGNC:9598
See related
Ensembl:ENSGALG00010010996
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (53758151..53849397, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (54049202..54140349, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 263 Neighboring gene RIC8 guanine nucleotide exchange factor B Neighboring gene RNA polymerase III subunit B Neighboring gene t-complex 11 family X2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor RFX4
Names
regulatory factor X, 4 (influences HLA class II expression)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    53758151..53849397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004937813.5 → XP_004937870.2  transcription factor RFX4 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y7N9, A0A8V0YBG3
    Related
    ENSGALP00010014981.1, ENSGALT00010026357.1

  2. XM_040702998.2 → XP_040558932.1  transcription factor RFX4 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y2Z9

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    54049202..54140349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040657431.2 → XP_040513365.1  transcription factor RFX4 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y7N9, A0A8V0YBG3

  2. XM_040657433.2 → XP_040513367.1  transcription factor RFX4 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y2Z9
Nucleotide Protein
Heading Accession and Version

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