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PPME1 protein phosphatase methylesterase 1 [ Gallus gallus (chicken) ]

Gene ID: 419058, updated on 3-Apr-2024

Summary

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Symbol
PPME1provided by CGNC
Full Name
protein phosphatase methylesterase 1provided by CGNC
Primary source
CGNC:50906
See related
Ensembl:ENSGALG00010002478
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PPME1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (194753909..194784005, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (194622327..194652375, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene signal peptidase complex subunit 2 Neighboring gene neuraminidase 3 Neighboring gene prolyl 4-hydroxylase subunit alpha 3 Neighboring gene C2 domain containing 3 centriole elongation regulator Neighboring gene uncharacterized LOC121109224 Neighboring gene uncoupling protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein methylesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase methylesterase 1
NP_001026005.2
XP_040556428.1
XP_040556430.1
XP_046764327.1
XP_046764328.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030834.2 → NP_001026005.2  protein phosphatase methylesterase 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000032
    Related
    ENSGALP00010003570.1, ENSGALT00010005742.1
    Conserved Domains (1) summary
    COG0596
    Location:72 → 372
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    194753909..194784005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040700496.1 → XP_040556430.1  protein phosphatase methylesterase 1 isoform X2

    UniProtKB/TrEMBL
    Q5ZHM0
    Related
    ENSGALP00010003568.1, ENSGALT00010005738.1
    Conserved Domains (1) summary
    COG0596
    Location:21 → 321
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

  2. XM_040700494.1 → XP_040556428.1  protein phosphatase methylesterase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XD87
    Related
    ENSGALP00010003569.1, ENSGALT00010005740.1
    Conserved Domains (1) summary
    COG0596
    Location:43 → 343
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    194622327..194652375 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046908372.1 → XP_046764328.1  protein phosphatase methylesterase 1 isoform X2

  2. XM_046908371.1 → XP_046764327.1  protein phosphatase methylesterase 1 isoform X1

Nucleotide Protein Strain
Heading Accession and Version

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