SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 [Gallus gallus (chicken)] - Gene

Summary

Symbol: SPSB1provided by CGNC
Full Name: splA/ryanodine receptor domain and SOCS box containing 1provided by CGNC
Primary source: CGNC:1796
See related: Ensembl:ENSGALG00010017441
Gene type: protein coding
RefSeq status: MODEL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 21

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	21	NC_052552.1 (3310913..3345213)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	21	NC_052593.1 (3344407..3378761)

Chromosome 21 - NC_052552.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in intracellular signal transduction	IEA Inferred from Electronic Annotation more info	PubMed
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of SCF ubiquitin ligase complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: SPRY domain-containing SOCS box protein 1

Names: SPRY domain-containing SOCS box protein SSB-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052552.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

3310913..3345213

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_004947450.5 → XP_004947507.1 SPRY domain-containing SOCS box protein 1

See identical proteins and their annotated locations for XP_004947507.1

UniProtKB/TrEMBL

A0A8V0YUB8, E1C5U4

Conserved Domains (2) summary

cd12906
Location:54 → 227

SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)

cl02533
Location:232 → 273

SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
XM_046903270.1 → XP_046759226.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

E1C5U4
XM_046903269.1 → XP_046759225.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

E1C5U4
XM_417599.7 → XP_417599.1 SPRY domain-containing SOCS box protein 1

See identical proteins and their annotated locations for XP_417599.1

UniProtKB/TrEMBL

A0A8V0YUB8, E1C5U4

Conserved Domains (2) summary

cd12906
Location:54 → 227

SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)

cl02533
Location:232 → 273

SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
XM_025142572.3 → XP_024998340.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

A0A8V0YUB8, E1C5U4

Conserved Domains (2) summary

cd12906
Location:54 → 227

SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)

cl02533
Location:232 → 273

SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
XM_046903271.1 → XP_046759227.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

E1C5U4
XM_004947449.5 → XP_004947506.1 SPRY domain-containing SOCS box protein 1

See identical proteins and their annotated locations for XP_004947506.1

UniProtKB/TrEMBL

A0A8V0YUB8, E1C5U4

Related

ENSGALP00010024651.1, ENSGALT00010042098.1

Conserved Domains (2) summary

cd12906
Location:54 → 227

SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)

cl02533
Location:232 → 273

SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
XM_040651331.2 → XP_040507265.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

A0A8V0YUB8, E1C5U4

Conserved Domains (2) summary

cd12906
Location:54 → 227

SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)

cl02533
Location:232 → 273

SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052593.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

3344407..3378761

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040689121.2 → XP_040545055.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

A0A8V0YUB8, E1C5U4

Conserved Domains (2) summary

cd12906
Location:54 → 227

SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)

cl02533
Location:232 → 273

SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
XM_046931470.1 → XP_046787426.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

E1C5U4
XM_046931469.1 → XP_046787425.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

E1C5U4
XM_040689125.1 → XP_040545059.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

A0A8V0YUB8, E1C5U4

Conserved Domains (2) summary

cd12906
Location:54 → 227

SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)

cl02533
Location:232 → 273

SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
XM_040689122.2 → XP_040545056.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

A0A8V0YUB8, E1C5U4

Conserved Domains (2) summary

cd12906
Location:54 → 227

SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)

cl02533
Location:232 → 273

SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
XM_046931471.1 → XP_046787427.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

E1C5U4
XM_040689123.2 → XP_040545057.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

A0A8V0YUB8, E1C5U4

Conserved Domains (2) summary

cd12906
Location:54 → 227

SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)

cl02533
Location:232 → 273

SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
XM_040689124.2 → XP_040545058.1 SPRY domain-containing SOCS box protein 1

UniProtKB/TrEMBL

A0A8V0YUB8, E1C5U4

Conserved Domains (2) summary

cd12906
Location:54 → 227

SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)

cl02533
Location:232 → 273

SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...