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APOBEC2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 [ Gallus gallus (chicken) ]

Gene ID: 419915, updated on 5-Mar-2024

Summary

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Symbol
APOBEC2provided by CGNC
Full Name
apolipoprotein B mRNA editing enzyme catalytic subunit 2provided by CGNC
Primary source
CGNC:2343
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 26
Exon count:
3
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (4750843..4758705)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (4719148..4727014)

Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene translocator protein 2 Neighboring gene uncharacterized LOC107055181 Neighboring gene O-acyl-ADP-ribose deacylase 1 Neighboring gene nuclear transcription factor Y subunit alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytidine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytidine to uridine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C->U-editing enzyme APOBEC-2
Names
apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2
XP_040547579.1
XP_418038.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4750843..4758705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_418038.7 → XP_418038.1  C->U-editing enzyme APOBEC-2

    UniProtKB/TrEMBL
    A0A8V1A4V2
    Conserved Domains (1) summary
    pfam18778
    Location:45 → 221
    NAD1; Novel AID APOBEC clade 1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4719148..4727014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040691645.2 → XP_040547579.1  C->U-editing enzyme APOBEC-2

    UniProtKB/TrEMBL
    A0A8V1A4V2
    Conserved Domains (1) summary
    pfam18778
    Location:45 → 221
    NAD1; Novel AID APOBEC clade 1
Nucleotide Protein Strain
Heading Accession and Version

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