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ATAD2 ATPase family, AAA domain containing 2 [ Gallus gallus (chicken) ]

Gene ID: 420346, updated on 5-Mar-2024

Summary

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Symbol
ATAD2provided by CGNC
Full Name
ATPase family, AAA domain containing 2provided by CGNC
Primary source
CGNC:12253
See related
Ensembl:ENSGALG00010008023
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
28
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (137000954..137034979, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (137209665..137243776, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene chromosome 2 C8orf76 homolog Neighboring gene chromosome 2 open reading frame, human C8orf76 Neighboring gene WDYHV motif containing 1 Neighboring gene F-box protein 32

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATPase family AAA domain-containing protein 2
XP_004940083.2
XP_040520727.1
XP_040520728.1
XP_418453.5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    137000954..137034979 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004940026.5 → XP_004940083.2  ATPase family AAA domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XR47, A0A8V0Y018
    Related
    ENSGALP00010010683.1, ENSGALT00010019134.1
    Conserved Domains (3) summary
    cd05528
    Location:888 → 999
    Bromo_AAA; Bromodomain; sub-family co-occurring with AAA domains. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine. The structure(2DKW) in this ...
    CHL00195
    Location:683 → 836
    ycf46; Ycf46; Provisional
    TIGR01243
    Location:328 → 599
    CDC48; AAA family ATPase, CDC48 subfamily

  2. XM_418453.8 → XP_418453.5  ATPase family AAA domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y018
    Related
    ENSGALP00010010686.1, ENSGALT00010019137.1
    Conserved Domains (3) summary
    cd05528
    Location:925 → 1036
    Bromo_AAA; Bromodomain; sub-family co-occurring with AAA domains. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine. The structure(2DKW) in this ...
    CHL00195
    Location:720 → 873
    ycf46; Ycf46; Provisional
    TIGR01243
    Location:365 → 636
    CDC48; AAA family ATPase, CDC48 subfamily

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    137209665..137243776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040664794.2 → XP_040520728.1  ATPase family AAA domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y018
    Conserved Domains (3) summary
    cd05528
    Location:888 → 999
    Bromo_AAA; Bromodomain; sub-family co-occurring with AAA domains. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine. The structure(2DKW) in this ...
    CHL00195
    Location:683 → 836
    ycf46; Ycf46; Provisional
    TIGR01243
    Location:328 → 599
    CDC48; AAA family ATPase, CDC48 subfamily

  2. XM_040664793.2 → XP_040520727.1  ATPase family AAA domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y018
    Conserved Domains (3) summary
    cd05528
    Location:925 → 1036
    Bromo_AAA; Bromodomain; sub-family co-occurring with AAA domains. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine. The structure(2DKW) in this ...
    CHL00195
    Location:720 → 873
    ycf46; Ycf46; Provisional
    TIGR01243
    Location:365 → 636
    CDC48; AAA family ATPase, CDC48 subfamily
Nucleotide Protein
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