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DTNA dystrobrevin alpha [ Gallus gallus (chicken) ]

Gene ID: 421104, updated on 3-Apr-2024

Summary

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Symbol
DTNAprovided by CGNC
Full Name
dystrobrevin alphaprovided by CGNC
Primary source
CGNC:11319
See related
Ensembl:ENSGALG00010005351
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
28
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (106986936..107207290)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (107052040..107272610)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417042 Neighboring gene additional sex combs like 3, transcriptional regulator Neighboring gene nucleolar protein 4 Neighboring gene uncharacterized LOC121109595 Neighboring gene microtubule associated protein RP/EB family member 2 Neighboring gene uncharacterized LOC124417693 Neighboring gene selenoprotein I 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Ordered disorder of the astrocytic dystrophin-associated protein complex in the norm and pathology. Na I, et al. PLoS One, 2013. PMID 24014171, Free PMC Article
  2. Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags. Hubbard SJ, et al. Genome Res, 2005 Jan. PMID 15590942, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Ordered disorder of the astrocytic dystrophin-associated protein complex in the norm and pathology.
    Title: Ordered disorder of the astrocytic dystrophin-associated protein complex in the norm and pathology.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in synaptic signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dystrobrevin alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    106986936..107207290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046937866.1 → XP_046793822.1  dystrobrevin alpha isoform X2

  2. XM_015282622.4 → XP_015138108.1  dystrobrevin alpha isoform X2

    UniProtKB/TrEMBL
    A0A1D5NYE9
    Conserved Domains (3) summary
    PRK12704
    Location:497 → 592
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16249
    Location:54 → 214
    EFh_DTNA; EF-hand-like motif found in alpha-dystrobrevin

  3. XM_025147924.3 → XP_025003692.1  dystrobrevin alpha isoform X1

    UniProtKB/TrEMBL
    A0A1D5NYE9
    Related
    ENSGALP00010007266.1, ENSGALT00010012702.1
    Conserved Domains (3) summary
    COG1340
    Location:506 → 606
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    cd02334
    Location:247 → 295
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16249
    Location:60 → 220
    EFh_DTNA; EF-hand-like motif found in alpha-dystrobrevin

  4. XM_015282621.4 → XP_015138107.1  dystrobrevin alpha isoform X2

    UniProtKB/TrEMBL
    A0A1D5NYE9
    Conserved Domains (3) summary
    PRK12704
    Location:497 → 592
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16249
    Location:54 → 214
    EFh_DTNA; EF-hand-like motif found in alpha-dystrobrevin

  5. XM_046937865.1 → XP_046793821.1  dystrobrevin alpha isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    107052040..107272610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046911881.1 → XP_046767837.1  dystrobrevin alpha isoform X2

  2. XM_040663121.2 → XP_040519055.1  dystrobrevin alpha isoform X2

    UniProtKB/TrEMBL
    A0A1D5NYE9
    Conserved Domains (3) summary
    PRK12704
    Location:497 → 592
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16249
    Location:54 → 214
    EFh_DTNA; EF-hand-like motif found in alpha-dystrobrevin

  3. XM_040663120.2 → XP_040519054.1  dystrobrevin alpha isoform X1

    UniProtKB/TrEMBL
    A0A1D5NYE9
    Conserved Domains (3) summary
    COG1340
    Location:506 → 606
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    cd02334
    Location:247 → 295
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16249
    Location:60 → 220
    EFh_DTNA; EF-hand-like motif found in alpha-dystrobrevin

  4. XM_046911880.1 → XP_046767836.1  dystrobrevin alpha isoform X2

  5. XM_040663122.2 → XP_040519056.1  dystrobrevin alpha isoform X2

    UniProtKB/TrEMBL
    A0A1D5NYE9
    Conserved Domains (3) summary
    PRK12704
    Location:497 → 592
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16249
    Location:54 → 214
    EFh_DTNA; EF-hand-like motif found in alpha-dystrobrevin
Nucleotide Protein
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