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TUB5A tubulin, alpha 5 [ Gallus gallus (chicken) ]

Gene ID: 421169, updated on 19-Sep-2023

Summary

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Official Symbol
TUB5Aprovided by CGNC
Official Full Name
tubulin, alpha 5provided by CGNC
Primary source
CGNC:84083
See related
Ensembl:ENSGALG00010026036
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
TUBA2; TUBA5; TUBA3E
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Genomic context

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Location:
chromosome: 26
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (563195..571188)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (532361..540342)

Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 12 Neighboring gene RAB interacting factor Neighboring gene lysine demethylase 5B Neighboring gene importin 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A survey of the alpha-tubulin gene family in chicken: unexpected sequence heterogeneity in the polypeptides encoded by five expressed genes. Pratt LF, et al. EMBO J, 1988 Apr. PMID 3267229, Free PMC Article
  2. Gene expression profiling of chicken primordial germ cell ESTs. Han JY, et al. BMC Genomics, 2006 Aug 30. PMID 16939661, Free PMC Article
  3. Expressed sequence tag analysis of Eimeria-stimulated intestinal intraepithelial lymphocytes in chickens. Min W, et al. Mol Biotechnol, 2005 Jun. PMID 15920284
  4. Conserved BK channel-protein interactions reveal signals relevant to cell death and survival. Sokolowski B, et al. PLoS One, 2011. PMID 22174833, Free PMC Article
  5. ESTs from brain and testis of White Leghorn and red junglefowl: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels. Savolainen P, et al. Cytogenet Genome Res, 2005. PMID 16093725

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin alpha-5 chain
Names
alpha tubulin
tubulin alpha-8 chain
tubulin, alpha 2
tubulin, alpha 3e

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001305140.2 → NP_001292069.1  tubulin alpha-5 chain

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000356
    UniProtKB/TrEMBL
    A0A1D5PAR5, A0A8V1A7K9
    Related
    ENSGALP00010039200.1, ENSGALT00010063501.1
    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 448
    PTZ00335; tubulin alpha chain; Provisional

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    563195..571188
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    532361..540342
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P09645.1 GenPept UniProtKB/Swiss-Prot:P09645

Gene LinkOut

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Molecular Biology Databases
Research Materials
Miscellaneous