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HN1 hematological and neurological expressed 1 [ Gallus gallus (chicken) ]

Gene ID: 422119, updated on 3-Apr-2024

Summary

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Symbol
HN1provided by CGNC
Full Name
hematological and neurological expressed 1provided by CGNC
Primary source
CGNC:6027
See related
Ensembl:ENSGALG00010029693
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
ARM2; HN1A; JPT1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (11262869..11302996, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (10863371..10903476, complement)

Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon UCG) Neighboring gene 5-hydroxytryptamine receptor 3A like Neighboring gene ATP synthase, H+ transporting, mitochondrial Fo complex subunit D Neighboring gene potassium channel tetramerization domain containing 2 Neighboring gene solute carrier family 16 member 5 Neighboring gene armadillo repeat containing 7 Neighboring gene small ubiquitin-like modifier 2 Neighboring gene uncharacterized LOC121107144

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning, expression and subcellular localization of HN1 and HN1L genes, as well as characterization of their orthologs, defining an evolutionarily conserved gene family. Zhou G, et al. Gene, 2004 Apr 28. PMID 15094197
  2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
jupiter microtubule associated homolog 1
Names
Jupiter microtubule associated homolog 1
hematological and neurological expressed 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006425.3 → NP_001006425.2  jupiter microtubule associated homolog 1 isoform 3

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000317
    UniProtKB/TrEMBL
    I7LRG5, Q5ZMA4
    Related
    ENSGALP00010044507.1, ENSGALT00010071817.1
    Conserved Domains (1) summary
    pfam17054
    Location:14 → 58
    JUPITER; Microtubule-Associated protein Jupiter

  2. NM_001389421.2 → NP_001376350.1  jupiter microtubule associated homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000317
    UniProtKB/TrEMBL
    A0A1L1RUW4, A0A8V1APU1
    Related
    ENSGALP00010044505.1, ENSGALT00010071815.1
    Conserved Domains (1) summary
    pfam17054
    Location:19 → 63
    JUPITER; Microtubule-Associated protein Jupiter

  3. NM_001389422.1 → NP_001376351.1  jupiter microtubule associated homolog 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000317
    UniProtKB/TrEMBL
    A0A1D5PVQ7, Q5ZMA4
    Related
    ENSGALP00010044509.1, ENSGALT00010071819.1
    Conserved Domains (1) summary
    pfam17054
    Location:14 → 58
    JUPITER; Microtubule-Associated protein Jupiter

  4. NM_001389423.1 → NP_001376352.1  jupiter microtubule associated homolog 1 isoform 4

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000317
    UniProtKB/TrEMBL
    A0A8V1AND5
    Related
    ENSGALP00010044510.1, ENSGALT00010071820.1
    Conserved Domains (1) summary
    pfam17054
    Location:14 → 58
    JUPITER; Microtubule-Associated protein Jupiter

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    11262869..11302996 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040649521.2 → XP_040505455.1  jupiter microtubule associated homolog 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AND5
    Conserved Domains (1) summary
    pfam17054
    Location:14 → 58
    JUPITER; Microtubule-Associated protein Jupiter

  2. XM_040649520.2 → XP_040505454.1  jupiter microtubule associated homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PVQ7, Q5ZMA4
    Conserved Domains (1) summary
    pfam17054
    Location:14 → 58
    JUPITER; Microtubule-Associated protein Jupiter

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    10863371..10903476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046929473.1 → XP_046785429.1  jupiter microtubule associated homolog 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AND5

  2. XM_046929472.1 → XP_046785428.1  jupiter microtubule associated homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PVQ7
Nucleotide Protein Strain
Heading Accession and Version

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