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RUFY3 RUN and FYVE domain containing 3 [ Gallus gallus (chicken) ]

Gene ID: 422645, updated on 4-Sep-2021

Summary

Symbol
RUFY3provided by CGNC
Full Name
RUN and FYVE domain containing 3provided by CGNC
Primary source
CGNC:8788
See related
Ensembl:ENSGALG00000011564
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See RUFY3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
25
Annotation release Status Assembly Chr Location
105 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (49533812..49584116)
105 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.1) 4 NC_052576.1 (49537946..49588230)
104 previous assembly GRCg6a (GCF_000002315.5) 4 NC_006091.5 (50027788..50078057)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 4 NC_006091.4 (50360514..50410756)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC422643 Neighboring gene joining chain of multimeric IgA and IgM Neighboring gene UTP3, small subunit processome component homolog (S. cerevisiae) Neighboring gene G-rich RNA sequence binding factor 1 Neighboring gene microRNA 1751

Genomic regions, transcripts, and products

General gene information

Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    49533812..49584116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015276415.3XP_015131901.1  protein RUFY3 isoform X5

    Conserved Domains (4) summary
    PRK06995
    Location:4128
    flhF; flagellar biosynthesis protein FlhF
    TIGR02168
    Location:283500
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd15744
    Location:570619
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:143264
    RUN; RUN domain
  2. XM_015276412.3XP_015131898.1  protein RUFY3 isoform X1

    Conserved Domains (4) summary
    COG1196
    Location:298537
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    PRK06995
    Location:4128
    flhF; flagellar biosynthesis protein FlhF
    cd15744
    Location:610659
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:143264
    RUN; RUN domain
  3. XM_040699739.1XP_040555673.1  protein RUFY3 isoform X10

    Conserved Domains (3) summary
    smart00593
    Location:203265
    RUN; domain involved in Ras-like GTPase signaling
    PRK06995
    Location:4128
    flhF; flagellar biosynthesis protein FlhF
    TIGR02168
    Location:283485
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  4. XM_015276413.3XP_015131899.1  protein RUFY3 isoform X2

    Related
    ENSGALP00000018837.6
    Conserved Domains (4) summary
    COG1196
    Location:298537
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    PRK06995
    Location:4128
    flhF; flagellar biosynthesis protein FlhF
    cd15744
    Location:606655
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:143264
    RUN; RUN domain
  5. XM_015276414.3XP_015131900.1  protein RUFY3 isoform X3

    Conserved Domains (3) summary
    COG1196
    Location:276515
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15744
    Location:588637
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:121242
    RUN; RUN domain
  6. XM_420599.7XP_420599.3  protein RUFY3 isoform X4

    Related
    ENSGALP00000066085.1
    Conserved Domains (3) summary
    COG1196
    Location:258497
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15744
    Location:570619
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:103224
    RUN; RUN domain
  7. XM_040699735.1XP_040555669.1  protein RUFY3 isoform X6

    Conserved Domains (3) summary
    smart00593
    Location:163225
    RUN; domain involved in Ras-like GTPase signaling
    TIGR02169
    Location:272576
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd15744
    Location:566615
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
  8. XM_040699740.1XP_040555674.1  protein RUFY3 isoform X12

    Conserved Domains (2) summary
    COG1196
    Location:258467
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02759
    Location:103224
    RUN; RUN domain
  9. XM_004941179.4XP_004941236.1  protein RUFY3 isoform X12

    UniProtKB/TrEMBL
    A0A1D5NU90
    Conserved Domains (2) summary
    COG1196
    Location:258467
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02759
    Location:103224
    RUN; RUN domain
  10. XM_015276417.3XP_015131903.1  protein RUFY3 isoform X11

    Related
    ENSGALP00000043900.2
    Conserved Domains (2) summary
    COG1196
    Location:276485
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02759
    Location:121242
    RUN; RUN domain
  11. XM_040699734.1XP_040555668.1  protein RUFY3 isoform X6

    Conserved Domains (3) summary
    smart00593
    Location:163225
    RUN; domain involved in Ras-like GTPase signaling
    TIGR02169
    Location:272576
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd15744
    Location:566615
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
  12. XM_040699736.1XP_040555670.1  protein RUFY3 isoform X8

    Conserved Domains (3) summary
    smart00593
    Location:115177
    RUN; domain involved in Ras-like GTPase signaling
    TIGR02169
    Location:224532
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd15744
    Location:522571
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
  13. XM_040699737.1XP_040555671.1  protein RUFY3 isoform X9

    Conserved Domains (3) summary
    smart00593
    Location:99161
    RUN; domain involved in Ras-like GTPase signaling
    TIGR02169
    Location:208516
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd15744
    Location:506555
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
  14. XM_040699738.1XP_040555672.1  protein RUFY3 isoform X9

    Conserved Domains (3) summary
    smart00593
    Location:99161
    RUN; domain involved in Ras-like GTPase signaling
    TIGR02169
    Location:208516
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd15744
    Location:506555
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
  15. XM_015276416.2XP_015131902.1  protein RUFY3 isoform X7

    Related
    ENSGALP00000073208.1
    Conserved Domains (3) summary
    COG1196
    Location:218457
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15744
    Location:530579
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:63184
    RUN; RUN domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    49537946..49588230
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040670882.1XP_040526816.1  protein RUFY3 isoform X5

    Conserved Domains (4) summary
    PRK06995
    Location:4128
    flhF; flagellar biosynthesis protein FlhF
    TIGR02168
    Location:283500
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd15744
    Location:570619
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:143264
    RUN; RUN domain
  2. XM_040670877.1XP_040526811.1  protein RUFY3 isoform X1

    Conserved Domains (4) summary
    COG1196
    Location:298537
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    PRK06995
    Location:4128
    flhF; flagellar biosynthesis protein FlhF
    cd15744
    Location:610659
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:143264
    RUN; RUN domain
  3. XM_040670889.1XP_040526823.1  protein RUFY3 isoform X10

    Conserved Domains (3) summary
    smart00593
    Location:203265
    RUN; domain involved in Ras-like GTPase signaling
    PRK06995
    Location:4128
    flhF; flagellar biosynthesis protein FlhF
    TIGR02168
    Location:283485
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  4. XM_040670878.1XP_040526812.1  protein RUFY3 isoform X2

    Conserved Domains (4) summary
    COG1196
    Location:298537
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    PRK06995
    Location:4128
    flhF; flagellar biosynthesis protein FlhF
    cd15744
    Location:606655
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:143264
    RUN; RUN domain
  5. XM_040670879.1XP_040526813.1  protein RUFY3 isoform X3

    Conserved Domains (3) summary
    COG1196
    Location:276515
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15744
    Location:588637
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:121242
    RUN; RUN domain
  6. XM_040670880.1XP_040526814.1  protein RUFY3 isoform X4

    Conserved Domains (3) summary
    COG1196
    Location:258497
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15744
    Location:570619
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:103224
    RUN; RUN domain
  7. XM_040670884.1XP_040526818.1  protein RUFY3 isoform X6

    Conserved Domains (3) summary
    smart00593
    Location:163225
    RUN; domain involved in Ras-like GTPase signaling
    TIGR02169
    Location:272576
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd15744
    Location:566615
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
  8. XM_040670892.1XP_040526826.1  protein RUFY3 isoform X12

    Conserved Domains (2) summary
    COG1196
    Location:258467
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02759
    Location:103224
    RUN; RUN domain
  9. XM_040670891.1XP_040526825.1  protein RUFY3 isoform X12

    Conserved Domains (2) summary
    COG1196
    Location:258467
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02759
    Location:103224
    RUN; RUN domain
  10. XM_040670890.1XP_040526824.1  protein RUFY3 isoform X11

    Conserved Domains (2) summary
    COG1196
    Location:276485
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02759
    Location:121242
    RUN; RUN domain
  11. XM_040670883.1XP_040526817.1  protein RUFY3 isoform X6

    Conserved Domains (3) summary
    smart00593
    Location:163225
    RUN; domain involved in Ras-like GTPase signaling
    TIGR02169
    Location:272576
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd15744
    Location:566615
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
  12. XM_040670886.1XP_040526820.1  protein RUFY3 isoform X8

    Conserved Domains (3) summary
    smart00593
    Location:115177
    RUN; domain involved in Ras-like GTPase signaling
    TIGR02169
    Location:224532
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd15744
    Location:522571
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
  13. XM_040670887.1XP_040526821.1  protein RUFY3 isoform X9

    Conserved Domains (3) summary
    smart00593
    Location:99161
    RUN; domain involved in Ras-like GTPase signaling
    TIGR02169
    Location:208516
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd15744
    Location:506555
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
  14. XM_040670888.1XP_040526822.1  protein RUFY3 isoform X9

    Conserved Domains (3) summary
    smart00593
    Location:99161
    RUN; domain involved in Ras-like GTPase signaling
    TIGR02169
    Location:208516
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd15744
    Location:506555
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
  15. XM_040670885.1XP_040526819.1  protein RUFY3 isoform X7

    Conserved Domains (3) summary
    COG1196
    Location:218457
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd15744
    Location:530579
    FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
    pfam02759
    Location:63184
    RUN; RUN domain
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