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POLR3A RNA polymerase III subunit A [ Gallus gallus (chicken) ]

Gene ID: 423727, updated on 3-Apr-2024

Summary

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Symbol
POLR3Aprovided by CGNC
Full Name
RNA polymerase III subunit Aprovided by CGNC
Primary source
CGNC:52037
See related
Ensembl:ENSGALG00010020737
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See POLR3A in Genome Data Viewer
Location:
chromosome: 6
Exon count:
32
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (13937296..13970568)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (13923645..13956941)

Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101750098 Neighboring gene ribosomal protein S24 Neighboring gene discs large MAGUK scaffold protein 5 Neighboring gene uncharacterized LOC112532710

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase III subunit RPC1
Names
DNA-directed RNA polymerase III subunit A
RNA polymerase III subunit C1
polymerase (RNA) III (DNA directed) polypeptide A, 155kDa
polymerase (RNA) III subunit A
NP_001006500.2
XP_040558334.1
XP_046776146.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006500.2 → NP_001006500.2  DNA-directed RNA polymerase III subunit RPC1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000231
    UniProtKB/Swiss-Prot
    Q5ZL98
    UniProtKB/TrEMBL
    A0A8V0ZLW0
    Related
    ENSGALP00010029626.1, ENSGALT00010050139.1
    Conserved Domains (3) summary
    cd02736
    Location:1021 → 1360
    RNAP_III_Rpc1_C; Largest subunit (Rpc1) of Eukaryotic RNA polymerase III (RNAP III), C-terminal domain
    CHL00117
    Location:841 → 1058
    rpoC2; RNA polymerase beta'' subunit; Reviewed
    cd02583
    Location:24 → 891
    RNAP_III_RPC1_N; Largest subunit (RPC1) of eukaryotic RNA polymerase III (RNAP III), N-terminal domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    13937296..13970568
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040702400.2 → XP_040558334.1  DNA-directed RNA polymerase III subunit RPC1 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZL98
    UniProtKB/TrEMBL
    A0A8V0Z8N2
    Related
    ENSGALP00010029625.1, ENSGALT00010050135.1
    Conserved Domains (2) summary
    cd02736
    Location:1033 → 1372
    RNAP_III_Rpc1_C; Largest subunit (Rpc1) of Eukaryotic RNA polymerase III (RNAP III), C-terminal domain
    cd02583
    Location:24 → 891
    RNAP_III_RPC1_N; Largest subunit (RPC1) of eukaryotic RNA polymerase III (RNAP III), N-terminal domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    13923645..13956941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046920190.1 → XP_046776146.1  DNA-directed RNA polymerase III subunit RPC1 isoform X1

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZL98.1 GenPept UniProtKB/Swiss-Prot:Q5ZL98

Gene LinkOut

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