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EXOC6 exocyst complex component 6 [ Gallus gallus (chicken) ]

Gene ID: 423807, updated on 25-Dec-2021

Summary

Symbol
EXOC6provided by CGNC
Full Name
exocyst complex component 6provided by CGNC
Primary source
CGNC:52056
See related
Ensembl:ENSGALG00000006763
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SEC15L1
Orthologs
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Genomic context

See EXOC6 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
27
Annotation release Status Assembly Chr Location
105 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (21370117..21456924, complement)
105 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.1) 6 NC_052578.1 (21261450..21346705, complement)
104 previous assembly GRCg6a (GCF_000002315.5) 6 NC_006093.5 (21537460..21623980, complement)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 6 NC_006093.4 (20567936..20654472, complement)

Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 26 subfamily A member 1 Neighboring gene cytochrome P450 family 26 subfamily C member 1 Neighboring gene uncharacterized LOC107053706 Neighboring gene hematopoietically expressed homeobox

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
exocyst complex component 6
Names
SEC15-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012905.2NP_001012923.1  exocyst complex component 6 isoform 2

    See identical proteins and their annotated locations for NP_001012923.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000232
    UniProtKB/TrEMBL
    Q5ZJ05
    Related
    ENSGALP00000055357.2, ENSGALT00000078605.2
    Conserved Domains (1) summary
    pfam04091
    Location:409715
    Sec15; Exocyst complex subunit Sec15-like
  2. NM_001397264.1NP_001384193.1  exocyst complex component 6 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000232
    Conserved Domains (1) summary
    pfam04091
    Location:450756
    Sec15; Exocyst complex subunit Sec15-like

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    21370117..21456924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015288612.3XP_015144098.1  exocyst complex component 6 isoform X4

    Conserved Domains (1) summary
    pfam04091
    Location:463769
    Sec15; Exocyst complex subunit Sec15-like
  2. XM_015288609.3XP_015144095.1  exocyst complex component 6 isoform X3

    Conserved Domains (1) summary
    pfam04091
    Location:463769
    Sec15; Exocyst complex subunit Sec15-like
  3. XM_015288608.3XP_015144094.1  exocyst complex component 6 isoform X2

    UniProtKB/TrEMBL
    A0A1D5PR36
    Related
    ENSGALP00000054529.1
    Conserved Domains (1) summary
    pfam04091
    Location:463779
    Sec15; Exocyst complex subunit Sec15-like
  4. XM_025151597.2XP_025007365.1  exocyst complex component 6 isoform X1

    Conserved Domains (1) summary
    pfam04091
    Location:463779
    Sec15; Exocyst complex subunit Sec15-like
  5. XM_015288614.3XP_015144100.1  exocyst complex component 6 isoform X6

    Conserved Domains (1) summary
    pfam04091
    Location:409725
    Sec15; Exocyst complex subunit Sec15-like
  6. XM_015288611.3XP_015144097.1  exocyst complex component 6 isoform X7

    Related
    ENSGALP00000048812.2
    Conserved Domains (1) summary
    pfam04091
    Location:450766
    Sec15; Exocyst complex subunit Sec15-like
  7. XM_015288613.3XP_015144099.1  exocyst complex component 6 isoform X8

    Conserved Domains (1) summary
    pfam04091
    Location:450756
    Sec15; Exocyst complex subunit Sec15-like
  8. XM_040702420.1XP_040558354.1  exocyst complex component 6 isoform X5

  9. XM_015288616.3XP_015144102.1  exocyst complex component 6 isoform X9

    Conserved Domains (1) summary
    pfam04091
    Location:463659
    Sec15; Exocyst complex subunit Sec15-like

RNA

  1. XR_001467181.3 RNA Sequence

  2. XR_005860624.1 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    21261450..21346705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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