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EXOC6 exocyst complex component 6 [ Gallus gallus (chicken) ]

Gene ID: 423807, updated on 3-Apr-2024

Summary

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Symbol
EXOC6provided by CGNC
Full Name
exocyst complex component 6provided by CGNC
Primary source
CGNC:52056
See related
Ensembl:ENSGALG00010017859
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SEC15L1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
26
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (21370117..21456864, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (21261447..21348151, complement)

Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121111226 Neighboring gene cytochrome P450 family 26 subfamily A member 1 Neighboring gene cytochrome P450 family 26 subfamily C member 1 Neighboring gene uncharacterized LOC107053706 Neighboring gene hematopoietically expressed homeobox

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi to plasma membrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle tethering involved in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of exocyst IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exocyst complex component 6
Names
SEC15-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012905.2 → NP_001012923.1  exocyst complex component 6 isoform 2

    See identical proteins and their annotated locations for NP_001012923.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000232
    UniProtKB/TrEMBL
    A0A1D5PR36, A0A8V0YX44, Q5ZJ05
    Related
    ENSGALP00010025653.1, ENSGALT00010043186.1
    Conserved Domains (1) summary
    pfam04091
    Location:409 → 715
    Sec15; Exocyst complex subunit Sec15-like

  2. NM_001397264.1 → NP_001384193.1  exocyst complex component 6 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000232
    UniProtKB/TrEMBL
    A0A8V0YX44, A0A8V0YX53
    Related
    ENSGALP00010025663.1, ENSGALT00010043198.1
    Conserved Domains (1) summary
    pfam04091
    Location:450 → 756
    Sec15; Exocyst complex subunit Sec15-like

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    21370117..21456864 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015288612.4 → XP_015144098.1  exocyst complex component 6 isoform X5

    UniProtKB/TrEMBL
    A0A8V0YX44
    Conserved Domains (1) summary
    pfam04091
    Location:463 → 769
    Sec15; Exocyst complex subunit Sec15-like

  2. XM_015288609.4 → XP_015144095.1  exocyst complex component 6 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YX44, A0A8V0ZB11
    Related
    ENSGALP00010025674.1, ENSGALT00010043215.1
    Conserved Domains (1) summary
    pfam04091
    Location:463 → 769
    Sec15; Exocyst complex subunit Sec15-like

  3. XM_015288608.4 → XP_015144094.1  exocyst complex component 6 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YX44, A0A8V0Z436
    Related
    ENSGALP00010025687.1, ENSGALT00010043234.1
    Conserved Domains (1) summary
    pfam04091
    Location:463 → 779
    Sec15; Exocyst complex subunit Sec15-like

  4. XM_025151597.3 → XP_025007365.1  exocyst complex component 6 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YX44, A0A8V0Z432
    Related
    ENSGALP00010025682.1, ENSGALT00010043226.1
    Conserved Domains (1) summary
    pfam04091
    Location:463 → 779
    Sec15; Exocyst complex subunit Sec15-like

  5. XM_015288614.4 → XP_015144100.1  exocyst complex component 6 isoform X7

    UniProtKB/TrEMBL
    A0A8V0YX44
    Conserved Domains (1) summary
    pfam04091
    Location:409 → 725
    Sec15; Exocyst complex subunit Sec15-like

  6. XM_040702420.2 → XP_040558354.1  exocyst complex component 6 isoform X6

    UniProtKB/TrEMBL
    A0A8V0YX44
    Related
    ENSGALP00010025647.1, ENSGALT00010043179.1

  7. XM_015288611.4 → XP_015144097.1  exocyst complex component 6 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YX44
    Related
    ENSGALP00010025658.1, ENSGALT00010043191.1
    Conserved Domains (1) summary
    pfam04091
    Location:450 → 766
    Sec15; Exocyst complex subunit Sec15-like

  8. XM_015288616.4 → XP_015144102.1  exocyst complex component 6 isoform X8

    UniProtKB/TrEMBL
    A0A8V0ZB06
    Conserved Domains (1) summary
    pfam04091
    Location:463 → 659
    Sec15; Exocyst complex subunit Sec15-like

RNA

  1. XR_001467181.4 RNA Sequence

  2. XR_005860624.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    21261447..21348151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046920275.1 → XP_046776231.1  exocyst complex component 6 isoform X5

  2. XM_046920273.1 → XP_046776229.1  exocyst complex component 6 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZB11

  3. XM_046920272.1 → XP_046776228.1  exocyst complex component 6 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Z436

  4. XM_046920271.1 → XP_046776227.1  exocyst complex component 6 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z432

  5. XM_046920277.1 → XP_046776233.1  exocyst complex component 6 isoform X7

  6. XM_046920276.1 → XP_046776232.1  exocyst complex component 6 isoform X6

  7. XM_046920274.1 → XP_046776230.1  exocyst complex component 6 isoform X4

  8. XM_046920278.1 → XP_046776234.1  exocyst complex component 6 isoform X8

RNA

  1. XR_006935010.1 RNA Sequence

  2. XR_006935011.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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