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SUCO SUN domain containing ossification factor [ Gallus gallus (chicken) ]

Gene ID: 424385, updated on 5-Mar-2024

Summary

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Official Symbol
SUCOprovided by CGNC
Official Full Name
SUN domain containing ossification factorprovided by CGNC
Primary source
CGNC:2232
See related
Ensembl:ENSGALG00010014928
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CH1; OPT; SLP1; C1orf9; C8H1ORF9; osteopotentia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
24
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (4478689..4517510, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (4490190..4529031, complement)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene Fas ligand (TNF superfamily, member 6) Neighboring gene tumor necrosis factor superfamily member 4 Neighboring gene uncharacterized LOC107053928 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class C Neighboring gene dynamin 3 Neighboring gene microRNA 199a-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein folding in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of bone remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SUN domain-containing ossification factor
Names
SUN-like protein 1
membrane protein CH1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4478689..4517510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004943187.4 → XP_004943244.3  SUN domain-containing ossification factor isoform X4

    UniProtKB/TrEMBL
    A0A8V0YQ97
    Related
    ENSGALP00010020835.1, ENSGALT00010035910.1
    Conserved Domains (2) summary
    pfam05483
    Location:855 → 963
    SCP-1; Synaptonemal complex protein 1 (SCP-1)
    PRK10811
    Location:585 → 775
    rne; ribonuclease E; Reviewed

  2. XM_004943185.4 → XP_004943242.3  SUN domain-containing ossification factor isoform X2

    UniProtKB/TrEMBL
    A0A8V0YX12
    Related
    ENSGALP00010020837.1, ENSGALT00010035912.1
    Conserved Domains (2) summary
    pfam05483
    Location:895 → 1003
    SCP-1; Synaptonemal complex protein 1 (SCP-1)
    PRK10811
    Location:625 → 815
    rne; ribonuclease E; Reviewed

  3. XM_004943186.4 → XP_004943243.3  SUN domain-containing ossification factor isoform X3

    UniProtKB/TrEMBL
    A0A8V0YQ96
    Related
    ENSGALP00010020833.1, ENSGALT00010035908.1
    Conserved Domains (1) summary
    PRK10811
    Location:632 → 822
    rne; ribonuclease E; Reviewed

  4. XM_422229.7 → XP_422229.6  SUN domain-containing ossification factor isoform X1

    UniProtKB/TrEMBL
    A0A8V0YX08
    Related
    ENSGALP00010020832.1, ENSGALT00010035906.1
    Conserved Domains (2) summary
    pfam05483
    Location:902 → 1010
    SCP-1; Synaptonemal complex protein 1 (SCP-1)
    PRK10811
    Location:632 → 822
    rne; ribonuclease E; Reviewed

  5. XM_015290422.4 → XP_015145908.3  SUN domain-containing ossification factor isoform X5

    Conserved Domains (2) summary
    pfam05483
    Location:902 → 1010
    SCP-1; Synaptonemal complex protein 1 (SCP-1)
    PRK10811
    Location:632 → 822
    rne; ribonuclease E; Reviewed

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4490190..4529031 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040677920.1 → XP_040533854.1  SUN domain-containing ossification factor isoform X4

    UniProtKB/TrEMBL
    A0A8V0YQ97
    Conserved Domains (2) summary
    pfam05483
    Location:855 → 963
    SCP-1; Synaptonemal complex protein 1 (SCP-1)
    PRK10811
    Location:585 → 775
    rne; ribonuclease E; Reviewed

  2. XM_040677918.1 → XP_040533852.1  SUN domain-containing ossification factor isoform X2

    UniProtKB/TrEMBL
    A0A8V0YX12
    Conserved Domains (2) summary
    pfam05483
    Location:895 → 1003
    SCP-1; Synaptonemal complex protein 1 (SCP-1)
    PRK10811
    Location:625 → 815
    rne; ribonuclease E; Reviewed

  3. XM_040677919.2 → XP_040533853.1  SUN domain-containing ossification factor isoform X3

    UniProtKB/TrEMBL
    A0A8V0YQ96
    Conserved Domains (1) summary
    PRK10811
    Location:632 → 822
    rne; ribonuclease E; Reviewed

  4. XM_040677917.1 → XP_040533851.1  SUN domain-containing ossification factor isoform X1

    UniProtKB/TrEMBL
    A0A8V0YX08
    Conserved Domains (2) summary
    pfam05483
    Location:902 → 1010
    SCP-1; Synaptonemal complex protein 1 (SCP-1)
    PRK10811
    Location:632 → 822
    rne; ribonuclease E; Reviewed

  5. XM_040677921.2 → XP_040533855.1  SUN domain-containing ossification factor isoform X5

    Conserved Domains (2) summary
    pfam05483
    Location:902 → 1010
    SCP-1; Synaptonemal complex protein 1 (SCP-1)
    PRK10811
    Location:632 → 822
    rne; ribonuclease E; Reviewed
Nucleotide Protein
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