U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PATJ PATJ, crumbs cell polarity complex component [ Gallus gallus (chicken) ]

Gene ID: 424682, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Symbol
PATJprovided by CGNC
Full Name
PATJ, crumbs cell polarity complex componentprovided by CGNC
Primary source
CGNC:8309
See related
Ensembl:ENSGALG00010023806
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
INADL
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 8
Exon count:
48
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (27002869..27145157)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (27016115..27158402)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene nuclear factor I A Neighboring gene uncharacterized LOC107054023 Neighboring gene TM2 domain containing 1 Neighboring gene KN motif and ankyrin repeat domains 4 Neighboring gene ubiquitin specific peptidase 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
inaD-like protein
Names
InaD-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    27002869..27145157
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025153268.3 → XP_025009036.2  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP83, A0A8V0ZY25
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1807 → 1891
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  2. XM_046944710.1 → XP_046800666.1  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZY25

  3. XM_046944709.1 → XP_046800665.1  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZY25

  4. XM_040705169.2 → XP_040561103.1  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP83, A0A8V0ZY25
    Related
    ENSGALP00010035219.1, ENSGALT00010058041.1
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1807 → 1891
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  5. XM_025153269.3 → XP_025009037.2  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP83, A0A8V0ZY25
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1807 → 1891
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  6. XM_040705170.2 → XP_040561104.1  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP83, A0A8V0ZY25
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1807 → 1891
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  7. XM_004936852.5 → XP_004936909.2  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP83, A0A8V0ZY25
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1807 → 1891
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  8. XM_025153272.3 → XP_025009040.2  inaD-like protein isoform X6

    UniProtKB/TrEMBL
    A0A8V0ZUF9, A0A8V1A1Y3
    Related
    ENSGALP00010035222.1, ENSGALT00010058044.1
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1044 → 1135
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  9. XM_025153270.3 → XP_025009038.2  inaD-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZP83, A0A8V0ZWI2
    Related
    ENSGALP00010035225.1, ENSGALT00010058047.1
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1806 → 1890
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  10. XM_025153273.3 → XP_025009041.2  inaD-like protein isoform X7

    UniProtKB/TrEMBL
    A0A8V0ZUF9
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1044 → 1135
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  11. XM_046944711.1 → XP_046800667.1  inaD-like protein isoform X4

  12. XM_025153271.3 → XP_025009039.2  inaD-like protein isoform X5

    UniProtKB/TrEMBL
    A0A8V0ZP75, A0A8V0ZP83
    Related
    ENSGALP00010035216.1, ENSGALT00010058038.1
    Conserved Domains (3) summary
    smart00228
    Location:1398 → 1483
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1762 → 1846
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  13. XM_004936853.5 → XP_004936910.2  inaD-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZP83
    Conserved Domains (3) summary
    smart00228
    Location:1442 → 1527
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1806 → 1890
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    27016115..27158402
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040678579.2 → XP_040534513.1  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP83
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1807 → 1891
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  2. XM_046923217.1 → XP_046779173.1  inaD-like protein isoform X1

  3. XM_046923216.1 → XP_046779172.1  inaD-like protein isoform X1

  4. XM_040678578.2 → XP_040534512.1  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP83
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1807 → 1891
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  5. XM_040678580.2 → XP_040534514.1  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP83
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1807 → 1891
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  6. XM_040678581.2 → XP_040534515.1  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP83
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1807 → 1891
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  7. XM_040678576.2 → XP_040534510.1  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP83
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1807 → 1891
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  8. XM_040678586.2 → XP_040534520.1  inaD-like protein isoform X6

    UniProtKB/TrEMBL
    A0A8V0ZUF9
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1044 → 1135
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  9. XM_040678582.2 → XP_040534516.1  inaD-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZP83
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1806 → 1890
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  10. XM_040678587.2 → XP_040534521.1  inaD-like protein isoform X7

    UniProtKB/TrEMBL
    A0A8V0ZUF9
    Conserved Domains (3) summary
    smart00228
    Location:1443 → 1528
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1044 → 1135
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  11. XM_046923218.1 → XP_046779174.1  inaD-like protein isoform X4

  12. XM_040678584.2 → XP_040534518.1  inaD-like protein isoform X5

    UniProtKB/TrEMBL
    A0A8V0ZP83
    Conserved Domains (3) summary
    smart00228
    Location:1398 → 1483
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1762 → 1846
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2

  13. XM_040678583.2 → XP_040534517.1  inaD-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZP83
    Conserved Domains (3) summary
    smart00228
    Location:1442 → 1527
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:1806 → 1890
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:8 → 65
    L27_2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.