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USHBP1 USH1 protein network component harmonin binding protein 1 [ Gallus gallus (chicken) ]

Gene ID: 427088, updated on 6-Jun-2024

Summary

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Symbol
USHBP1provided by CGNC
Full Name
USH1 protein network component harmonin binding protein 1provided by CGNC
Primary source
CGNC:52987
See related
Ensembl:ENSGALG00010028583
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See USHBP1 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 28 NC_052559.1 (3826396..3829962, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 28 NC_052600.1 (3388952..3392516, complement)

Chromosome 28 - NC_052559.1Genomic Context describing neighboring genes Neighboring gene occludin Neighboring gene nuclear receptor subfamily 2 group F member 6 Neighboring gene BRISC and BRCA1 A complex member 1 Neighboring gene ankyrin repeat and LEM domain containing 1 Neighboring gene abhydrolase domain containing 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
Usher syndrome type-1C protein-binding protein 1
Names
Usher syndrome 1C binding protein 1
Usher syndrome type-1C protein-binding protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052559.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    3826396..3829962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040653745.2 → XP_040509679.2  Usher syndrome type-1C protein-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8V1A9L8

  2. XM_040653744.2 → XP_040509678.2  Usher syndrome type-1C protein-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V1AEV5

  3. XM_040653743.2 → XP_040509677.2  Usher syndrome type-1C protein-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A9L8
    Related
    ENSGALP00010042662.1, ENSGALT00010069220.1

  4. XM_040653742.2 → XP_040509676.2  Usher syndrome type-1C protein-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AEV5

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052600.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    3388952..3392516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040692842.2 → XP_040548776.2  Usher syndrome type-1C protein-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8V1A9L8

  2. XM_046933955.1 → XP_046789911.1  Usher syndrome type-1C protein-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V1AEV5

  3. XM_046933954.1 → XP_046789910.1  Usher syndrome type-1C protein-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A9L8

  4. XM_046933953.1 → XP_046789909.1  Usher syndrome type-1C protein-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AEV5
Nucleotide Protein
Heading Accession and Version

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