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INIP INTS3 and NABP interacting protein [ Gallus gallus (chicken) ]

Gene ID: 427331, updated on 6-May-2021

Summary

Official Symbol
INIPprovided by CGNC
Official Full Name
INTS3 and NABP interacting proteinprovided by CGNC
Primary source
CGNC:14226
See related
Ensembl:ENSGALG00000020528
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
MISE; SOSSC; SSBIP1; C9orf80; HSPC043; hSSBIP1; CZH9ORF80
Orthologs
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Genomic context

See INIP in Genome Data Viewer
Location:
chromosome: Z
Exon count:
6
Annotation release Status Assembly Chr Location
105 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (66625590..66636095)
104 previous assembly GRCg6a (GCF_000002315.5) Z NC_006127.5 (66125224..66135709)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) Z NC_006127.4 (65920837..65931330)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 46 member 2 Neighboring gene sorting nexin family member 30 Neighboring gene KIAA1958 Neighboring gene uncharacterized LOC121108338 Neighboring gene hydroxysteroid dehydrogenase like 2

Genomic regions, transcripts, and products

General gene information

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in DNA repair IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in DNA repair ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cellular response to DNA damage stimulus ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in response to ionizing radiation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of SOSS complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of SOSS complex ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
SOSS complex subunit C
Names
SOSS-C
SSB-interacting protein 1
hSSB-interacting protein 1
minute INTS3/hSSB-associated element
sensor of single-strand DNA complex subunit C
sensor of ssDNA subunit C
single-stranded DNA-binding protein-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006585.1NP_001006585.1  SOSS complex subunit C

    See identical proteins and their annotated locations for NP_001006585.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ720602
    UniProtKB/Swiss-Prot
    Q5ZJ32
    Related
    ENSGALP00000032142.2, ENSGALT00000032779.5
    Conserved Domains (1) summary
    pfam15925
    Location:18100
    SOSSC; SOSS complex subunit C

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    66625590..66636095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015280606.3XP_015136092.1  SOSS complex subunit C isoform X1

    UniProtKB/TrEMBL
    F1NAD7
    Conserved Domains (1) summary
    pfam15925
    Location:18101
    SOSSC; SOSS complex subunit C
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