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UBQLN1 ubiquilin 1 [ Gallus gallus (chicken) ]

Gene ID: 427454, updated on 5-Mar-2024

Summary

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Official Symbol
UBQLN1provided by CGNC
Official Full Name
ubiquilin 1provided by CGNC
Primary source
CGNC:9551
See related
Ensembl:ENSGALG00010015628
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (40589102..40618347, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (40589102..40618347, complement)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene FERM domain containing 3 Neighboring gene IDNK, gluconokinase Neighboring gene uncharacterized LOC121108593 Neighboring gene G kinase anchoring protein 1 Neighboring gene kinesin family member 27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquilin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    40589102..40618347 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040656443.2 → XP_040512377.1  ubiquilin-1 isoform X9

    Conserved Domains (3) summary
    smart00727
    Location:302 → 334
    STI1; Heat shock chaperonin-binding motif
    cd14399
    Location:459 → 498
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins
    cd01808
    Location:28 → 100
    Ubl_PLICs; ubiquitin-like (Ubl) domain found in eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins

  2. XM_025144924.3 → XP_025000692.1  ubiquilin-1 isoform X7

    Conserved Domains (3) summary
    smart00727
    Location:333 → 365
    STI1; Heat shock chaperonin-binding motif
    cd01808
    Location:30 → 100
    hPLIC_N; Ubiquitin-like domain of hPLIC-1 and hPLIC2
    cd14399
    Location:489 → 528
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins

  3. XM_004949193.5 → XP_004949250.1  ubiquilin-1 isoform X6

    Conserved Domains (4) summary
    smart00727
    Location:333 → 365
    STI1; Heat shock chaperonin-binding motif
    cd01808
    Location:30 → 100
    hPLIC_N; Ubiquitin-like domain of hPLIC-1 and hPLIC2
    smart00213
    Location:30 → 100
    UBQ; Ubiquitin homologues
    cd14399
    Location:490 → 529
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins

  4. XM_040656441.2 → XP_040512375.1  ubiquilin-1 isoform X4

    Conserved Domains (3) summary
    smart00727
    Location:355 → 387
    STI1; Heat shock chaperonin-binding motif
    cd14399
    Location:511 → 550
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins
    cd01808
    Location:28 → 100
    Ubl_PLICs; ubiquitin-like (Ubl) domain found in eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins

  5. XM_025144923.3 → XP_025000691.1  ubiquilin-1 isoform X3

    Conserved Domains (3) summary
    smart00727
    Location:355 → 387
    STI1; Heat shock chaperonin-binding motif
    cd01808
    Location:30 → 100
    hPLIC_N; Ubiquitin-like domain of hPLIC-1 and hPLIC2
    cd14399
    Location:512 → 551
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins

  6. XM_425028.7 → XP_425028.2  ubiquilin-1 isoform X2

    UniProtKB/TrEMBL
    E1C477
    Conserved Domains (4) summary
    smart00727
    Location:386 → 418
    STI1; Heat shock chaperonin-binding motif
    cd01808
    Location:30 → 100
    hPLIC_N; Ubiquitin-like domain of hPLIC-1 and hPLIC2
    smart00213
    Location:30 → 100
    UBQ; Ubiquitin homologues
    cd14399
    Location:542 → 581
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins

  7. XM_004949194.5 → XP_004949251.1  ubiquilin-1 isoform X1

    UniProtKB/TrEMBL
    E1C477
    Related
    ENSGALP00010021743.1, ENSGALT00010037604.1
    Conserved Domains (4) summary
    smart00727
    Location:386 → 418
    STI1; Heat shock chaperonin-binding motif
    cd01808
    Location:30 → 100
    hPLIC_N; Ubiquitin-like domain of hPLIC-1 and hPLIC2
    smart00213
    Location:30 → 100
    UBQ; Ubiquitin homologues
    cd14399
    Location:543 → 582
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins

  8. XM_046905933.1 → XP_046761889.1  ubiquilin-1 isoform X8

  9. XM_040656442.2 → XP_040512376.1  ubiquilin-1 isoform X5

    Conserved Domains (2) summary
    cd14399
    Location:496 → 535
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins
    cl28922
    Location:2 → 53
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    40589102..40618347 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046936765.1 → XP_046792721.1  ubiquilin-1 isoform X9

  2. XM_046936763.1 → XP_046792719.1  ubiquilin-1 isoform X7

  3. XM_046936762.1 → XP_046792718.1  ubiquilin-1 isoform X6

  4. XM_046936760.1 → XP_046792716.1  ubiquilin-1 isoform X4

  5. XM_046936759.1 → XP_046792715.1  ubiquilin-1 isoform X3

  6. XM_046936758.1 → XP_046792714.1  ubiquilin-1 isoform X2

  7. XM_046936757.1 → XP_046792713.1  ubiquilin-1 isoform X1

    UniProtKB/TrEMBL
    E1C477

  8. XM_046936764.1 → XP_046792720.1  ubiquilin-1 isoform X8

  9. XM_046936761.1 → XP_046792717.1  ubiquilin-1 isoform X5

Nucleotide Protein
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