Format

Send to:

Choose Destination

TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [ Gallus gallus (chicken) ]

Gene ID: 427727, updated on 6-Nov-2021

Summary

Official Symbol
TAP1provided by CGNC
Official Full Name
transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)provided by CGNC
Primary source
CGNC:53176
See related
Ensembl:ENSGALG00000035075
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See TAP1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
105 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 16 NC_052547.1 (2216396..2221587, complement)
105 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.1) 16 NC_052588.1 (1117794..1122590, complement)
104 previous assembly GRCg6a (GCF_000002315.5) 16 NC_006103.5 (2595948..2601142, complement)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 16 NC_006103.4 (81798..86989)

Chromosome 16 - NC_052547.1Genomic Context describing neighboring genes Neighboring gene major histocompatibility complex, class II, DM beta 2 Neighboring gene MHC BF1 class I Neighboring gene transporter 2, ATP binding cassette subfamily B Neighboring gene Major histocompatibility complex class I antigen BF2

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
antigen peptide transporter 1
Names
antigen processing associated transporter 1
putative transporter associated with antigen processing 1
transporter associated with antigen presentation 1
transporter associated with antigen processing 1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001135968.2NP_001129440.2  antigen peptide transporter 1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000283
    Related
    ENSGALT00000047881.3
    Conserved Domains (1) summary
    TIGR00958
    Location:8558
    3a01208; Conjugate Transporter-2 (CT2) Family protein

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052547.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    2216396..2221587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015294989.3XP_015150475.1  antigen peptide transporter 1 isoform X1

    Conserved Domains (3) summary
    COG1120
    Location:336570
    FepC; ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component [Inorganic ion transport and metabolism, Coenzyme transport and metabolism]
    cl00549
    Location:70288
    ABC_membrane; ABC transporter transmembrane region
    cl21455
    Location:325550
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052588.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1117794..1122590 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center